2MZZ,5SWW,5W1C,2NYT,6X91


Conserved Protein Domain Family
APOBEC_C

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pfam05240: APOBEC_C (This model is not part of the current CDD release)
APOBEC-like C-terminal domain
This domain is found at the C-termini of the Apolipoprotein B mRNA editing enzyme.
Statistics
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PSSM-Id: 516723
Aligned: 71 rows
Threshold Bit Score: 92.9507
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2MZZ_A       101 HVTLTIFVARLYYAW-DPDYQEALRSLAQAGATIKIMNYDEFQHCWSKFVYS---QG---APFQPWDGLDEHSQALSGRL 173 synthetic const...
5_pfamImport   2 NVELSILAARLYYC---RDHEQGLRSLCNSGAELAIMVFRDFRYCWDNFVYH---HG---RHFIPWENIDANSDLLARKL 72 
8_pfamImport   2 NVDLSISAARLYLC--EDEDEQGLQDLVAAGAKVAMMAPEDFEYCWDNFVYN---RG---WPFTYWKHVRRNYGRLQEKL 73 
XP_007249974 204 TLRLNIHCSRLFL-WeEPEVQAALKALVQAGCKLRMMRPVDFTYVWSTFVEN---EE---ESFAPWEDCQDSYEYYDEKL 276
XP_013128596 191 KLRLCIFCSRLFE-WeEPEIVEGLKGLVRAGCKLRMMKPSDFLHVWETYVEK---ED---QSFTPWEDCQENYNYYVEKL 263
XP_015197979 204 TLRLTLMAARLFQ-WeEPEVQEGLRLLQAAGCKVRIMKPTDFSYVWDTFVDT---EE---QAFVPWEDMQENCEYYQERL 276
XP_005995520 147 NLRLSILAARLFM-WeEPEIQDGLRQLKAAGCKLKMMAPQDFVHTWKTFVEQ---EG---EDFVPWEEIQENTTYYEEKL 219
Q9Y235       144 NLRLLILVGRLFM-WeEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQeegES---KAFQPWEDIQENFLYYEEKL 219 human
2NYT_A       110 NLRLLILVGRLFMWE-EPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQ---EEgesKAFQPWEDIQENFLYYEEKL 185 human
XP_011611927 170 NIKLSIFAARLFE-WeEAEIQAGLKALHIAGCKIRVMKPLDFSYTWDTFVEN---ED---QPLNLWADCKENYEYYHERL 242 torafugu
2MZZ_A       174 GEIL 177 synthetic construct
5_pfamImport  73 EDLL 76 
8_pfamImport  74 DEIL 77 
XP_007249974 277 ANIL 280
XP_013128596 264 ADIL 267
XP_015197979 277 AEIL 280
XP_005995520 220 AEIL 223
Q9Y235       220 ADIL 223 human
2NYT_A       186 ADIL 189 human
XP_011611927 243 ADIL 246 torafugu
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