Conserved Protein Domain Family
RCSD

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pfam05177: RCSD 
RCSD region
Proteins contain this region include C.elegans UNC-89. This region is found repeated in UNC-89 and shows conservation in prolines, lysines and glutamic acids. Proteins with RCSD are involved in muscle M-line assembly, but the function of this region RCSD is not clear.
Statistics
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PSSM-Id: 398717
Aligned: 8 rows
Threshold Bit Score: 77.7848
Threshold Setting Gi: 1304960996
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O01761       1481 KSPVKKEKSPDATnivevssettiektettmTTEMTHESEES-RTSVKKEKTPEKV----DEKPKSPTKKD-------KS 1548 Caenorhabditi...
CAP31110     1675 KSPTKKEKSPEKP------------------TSPTKKTAEEAvKSPTKKEKSPEKI----EEKPKSPTKEE-------KS 1725 Caenorhabditi...
XP_005622619  229 RPPGAQEKPPLRR------------------TSSRTEKQEETgKAQDEAQHHPKAMggseEEAGPPPAANEavpaalaSS 290  dog
XP_011234227  202 rQLGSQEKPPLRR------------------TSSRTEKQEEKgRAAEEAQHPQKAAggseEEASRLPATEEavqpaqaSN 263  giant panda
XP_023410004  230 RSMGSEEKPPLRR------------------TSSMIETREEKgRAAEEAKHGEKAAehsaDKEPQSPAQGEaae-petSS 290  African savan...
AAI43429      199 RTLGPAEKPPLRR------------------SPSRTEKQEED-RATEEAKNGEKARrsseEVDGQHPAQEEvpespqtSG 259  human
XP_011289169  244 geLGSQEKPPPRR------------------TSSRTEKQEEKsRAPGEAQHHQEAVggseEEAGTRPAKEEavqpapaSN 305  domestic cat
XP_002646356 1481 KSPTKKEKSPEAKnivevsse--ttikkteaTAEVTKTSEEA-KSPTMKEKSPGKV----EEKPKSPTKKE-------KS 1546 Caenorhabditi...
O01761       1549 PEKSITEe-iKSPVKKE----------KSPEKVEEK----------------------------PASPTKKEKSPEkpaS 1589 Caenorhabditi...
CAP31110     1726 PEKSTGAedvKSPIKKE----------RSPDTVVEKeitssettktekssttttevtspikkspPGSPTKKQKKSK---S 1792 Caenorhabditi...
XP_005622619  291 PEAANGC---GSPTEEK----------APGEKTE------------------------------ESAEAKEERAGNeedE 327  dog
XP_011234227  264 PEAANRG---RSPTEEK----------AAREQIE------------------------------KSEEVKEERAGNeedE 300  giant panda
XP_023410004  291 PKAENGP---GTPTEET----------MAGEEVETE----------------------------KSAEVKEERAENeedK 329  African savan...
AAI43429      260 PEAENRC---GSPREEK----------PAGEEAEME----------------------------KATEVKGERVQNeevG 298  human
XP_011289169  306 PEAANGC---RSPTEEK----------PAGEQTE------------------------------KSAEVKEERAENeegE 342  domestic cat
XP_002646356 1547 PEKPT------SPTKKTedqpgspfppKSPTKIEEK----------------------------PSSPTQKK-------S 1585 Caenorhabditi...
O01761       1590 P 1590 Caenorhabditis elegans
CAP31110     1793 P 1793 Caenorhabditis briggsae
XP_005622619  328 P 328  dog
XP_011234227  301 P 301  giant panda
XP_023410004  330 P 330  African savanna elephant
AAI43429      299 P 299  human
XP_011289169  343 P 343  domestic cat
XP_002646356 1586 P 1586 Caenorhabditis briggsae
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