4CDP,4IMH


Conserved Protein Domain Family
HemS

?
pfam05171: HemS 
Haemin-degrading HemS.ChuX domain
The Yersinia enterocolitica O:8 periplasmic binding-protein- dependent transport system consisted of four proteins: the periplasmic haemin-binding protein HemT, the haemin permease protein HemU, the ATP-binding hydrophilic protein HemV and the haemin-degrading protein HemS (this family). The structure for HemS has been solved and consists of a tandem repeat of this domain.
Statistics
?
PSSM-Id: 398712
Aligned: 59 rows
Threshold Bit Score: 133.407
Threshold Setting Gi: 123593287
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4CDP_A         39 NIREAELAFARVT------H---DAWRMHGDIREILAALESVGETKCICRNEYAVHEQVGTFTNQHLNGHAGLILNPRaL 109
Q3J1D4         26 GIPEAALVAAFTG------P---EVVAIAADPRRLLPLARELGPALALTRNRSAVQEREGLYGPLSEEVGRLRLRGEG-I 95  Rhodobacter sp...
Q28QG2         32 GVPEAALLAAQIG------Y---GGVPMVADTTKLIPAICTLGEVMALTRNDSAVHEKIGVYDNFHPGDHASSVLTAD-I 101 Jannaschia sp....
WP_012177252   26 GLPEAALVAAQVG------H---DAVALRPHPNDLIPALGALGPMMALTRNDACVIEKDGEYTDYHGGDHATMTLNEG-I 95  Dinoroseobacte...
WP_011750431   28 GVPEAALVAARIG------H---GTTRIDPLPGRLIPRVQALGEVMALTRNRSCVIEKIGTYNDFHDGEHAAMTVDPE-I 97  Paracoccus den...
Q160G7         32 GISEAQLVAAFCG------M---GTVKIDAHPDVVMGLALTLGEVMALTRNTACVHEKVGFYENYHPGNHAAMVLSHD-I 101 Roseobacter de...
Q1GJT7         40 QIREAQLLAAYTG------R---GVTRLHAHPDAVMPQIERLGEVMALTRNASCVHERVGVYGNYKSGPHAAMILQPE-I 109 Ruegeria sp. T...
Q1H0W5         33 GITEGQAIANAVG------R---EAVRLKGPFHEIIAEVPKLGRVMALTRNEGTVHEKIGTYENVSFD-HVGLVVGPD-I 101 Methylobacillu...
jgi:Daci_5068  44 GLPEGAAIAAHAGq----hEgslQAVPLRAEWLAILKGLQDCGPVMALTRNESTVHEKTGVYQKLSVNGGVGLALGRD-I 118 Delftia acidov...
jgi:Veis_3081  31 CLSEGELIAAHAGsasddpNvilHATRLRPDWSGIMESLEPLGEAMALTRNASCVHEKTGVYRNASHQNHVGLVLGGA-I 109 Verminephrobac...
4CDP_A        110 DLRLFLNQWASVFHIKENT------AR-GERQSIQFFDHQGDALLKVYATDNTDMAAWSELLARF 167
Q3J1D4         96 EMLIDPRHWVHAFAVTEPT------AK-GAKRSVQVFDAAGEAVHKIHLVADSRSEAFDRLVAEL 153 Rhodobacter sphaeroides 2.4.1
Q28QG2        102 DLRLFSRHWVHAFAMEKEV-------DgTVRRSVQVFDAAGDAVHKVILRERSNIAMWDVMLRDL 159 Jannaschia sp. CCS1
WP_012177252   96 DLRMFPRHWVHAFAVSEQV------KS-GLRHSVQVFDAAGDAVHKAYLRDGADMAAWTRLQSDL 153 Dinoroseobacter shibae
WP_011750431   98 DLRIFPRHWVHAFAVEQEA------ET-GTRRSIQVFDAAGDAVHKIHLREGSDLPAWEALKRDL 155 Paracoccus denitrificans
Q160G7        102 DLRIFPSHWHHAFMVEKET------DT-GLRRSLQVFDAAGDAIHKVFLREGSDMAAWDAAKGDL 159 Roseobacter denitrificans OCh...
Q1GJT7        110 DLRLFPSHWIHAFALNEDT------DT-GPKRSIQIFDAAGDAVHKIHLRETSDHAAWDEVVAAL 167 Ruegeria sp. TM1040
Q1H0W5        102 DLRIFYSQWKHGYAVTEET------EK-GTQRSLQFYDATGTAVHKIHLKDFSNVDAWNNLVQKF 159 Methylobacillus flagellatus KT
jgi:Daci_5068 119 DLRIFFAQWHAGYAVTEQPaq---aGR-PAMRSLQFFNAQGRAVHKVHARESTDLQAWEALVQRF 179 Delftia acidovorans SPH-1
jgi:Veis_3081 110 DLRIFYRQWAHGFAVIEQTrpgkptEP-TEQRSLQFFDAEGTAIHKVFLKPGSDVAAYTRLVAHF 173 Verminephrobacter eiseniae EF...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap