5G5P


Conserved Protein Domain Family
DSS1_SEM1
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pfam05160: DSS1_SEM1 
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DSS1/SEM1 family
This family contains the breast cancer tumor suppressor BRCA2-interacting protein DSS1 and its homolog SEM1, both of which are short acidic proteins. DSS1 has been shown to be a conserved component of the Rae1 mediated mRNA export pathway in Schizosaccharomyces pombe.
Links
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Statistics
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PSSM-Id: 398704
Aligned: 84 rows
Threshold Bit Score: 26.7591
Threshold Setting Gi: 384495861
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5G5P_C            24 INKKSLEE-DDEFEDFPID-----TWangetIKSNAVTQ--TNIWEENWDDVEV-DDDFTNELKAE 80  baker's yeast
CBN75991          11 PVAEVLEE-DDEFEEFAEA-----NW-----DETAEDQEd-LQQWQDDWDDDDM-DDDFCNQLRAE 63  Ectocarpus siliculosus
A0DYA6            17 QVQKIFDEdDDDFEEFEQE-----DLev-nhDLKID-----IKQWREDWDDEDL-TDEFSIQLKQE 70  Paramecium tetraurelia
Q23BV9            79 EVAKVLDEdDDEFEEFQQE-----DWqdiqvDEKID-----VKQWREDWDDEDI-NDDFNQELRKQ 133 Tetrahymena thermophila S...
jgi:MICPUN_57984  11 EVAVDLEC-DDEFEEFGNE-----EW-----GAEEEDAEd-VNQWEEDWDDSEK-SDDFTRQLRAE 63  Micromonas commoda
EFJ42138          25 AAADLLEA-DDLFEEFGNG-----EW-----HGAKDDEG--APLWEADWEDENV-ADDFTARLKAE 76  Volvox carteri f. nagarie...
XP_001701229      24 PVADLLEA-DDLFEEFGTS-----EW-----QATKDDES--VPMWEADWEDENV-ADDFTGRLKRE 75  Chlamydomonas reinhardtii
EGG21260          32 EENEVIE--DDEFEEFEDNllsllMFrfdrlDVTCDDVDt-KEQWEDDWDTEHI-DDEFSKQLRQE 93  Cavenderia fasciculata
EFA84824          30 EEIEIIE--DDEFEEFEDNi-----------ENQNEDQDtvKAQWEDDWDTEQI-DDEFSQQLRQE 81  Heterostelium album PN500
O14140             7 PSLENLED-DDEFEDFATE-----NWpmkdtELDTGD----DTLWENNWDDEDIgDDDFSVQLQAE 62  Schizosaccharomyces pombe...
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