8RAM


Conserved Protein Domain Family
Zn_ribbon_Elf1

?
pfam05129: Zn_ribbon_Elf1 (This model is not part of the current CDD release)
Transcription elongation factor Elf1 like
This family of short proteins contains a putative zinc binding domain with four conserved cysteines. Elf1 has been identified as a transcription elongation factor in Saccharomyces cerevisiae.
Statistics
?
PSSM-Id: 516638
Aligned: 130 rows
Threshold Bit Score: 53.7302
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
8RAM_M          2 GKRKK----STRKptKRLVQK-LDTKFNCLFCNHEkS-VSCTLDKKNS--IGTLSCKICGQ-----------SFQ--TR- 59  brewer's yeast
14_pfamImport   1 GRRKR----KRQq--LKKPVRkIPKIFVCPHCSKEsLrIVIRPKQGEDkaIAEASCGECGF-----------CAR--FY- 60 
BAJ48193        3 RKRRKi---------IKRTPRpFPKVFSCPLCGAT-A-VRVVHEKKSE--TATVTCGNCNA-----------SAE--IP- 55 
Q4GZ56          2 GGTKK----KATVpiKKESKYkIPSHFDCPFCDAKkS-IAVRLKRSDG--LASVHCRVCRV-----------GENrhYN- 62  Trypanosoma br...
Q4D0K5          2 GGKKK----KTAVpiKKESKYkIPARFDCPLCDAKnS-IAVRLVRSSG--SARLHCRSCRA-----------GAGkeFP- 62  Trypanosoma cruzi
Q4QCV8          3 GKRKK----SNNGpvKKESKYkIPTRFDCPLCDAKaS-IVVRMFRATS--DATVQCRVCGA-----------GGTkrWN- 63  Leishmania major
Q4D0K4         40 DKRKRnlhyAAASrhQRSLH--CLTKFDCPVCCMKnT-VRVDLSTKEQ--NAVVRCTYCMSlrprpaelpypFLT--SF- 111 Trypanosoma cruzi
Q22CJ9          2 GGRK-----KTGKkeKKLRTYaIPKVFDCENCSSDqT-LHINISKKQNtkVAKIYCIKCKY-----------STK--YEk 62  Tetrahymena th...
Q6BGB4          2 GGRR-----KSNRmpKKEKVQsIKTIFDCALCGYKnC-VIVKIKKIIK--IAELNCDKCQV-----------SFH--TK- 59  Paramecium tet...
WP_012310169    2 GRRKR----RTITpvRRRRKS---AFLRCPSCQHN-S-ITVEVSKKDG--KAIIRCYNCGL-----------VRE--IE- 56  Candidatus Kor...
8RAM_M         60 INSLSQPVDVYSDWFDA 76  brewer's yeast
14_pfamImport  61 VPNIFEPVNAYGKVIDL 77 
BAJ48193       56 WYPAYSEVDVYTKWYDI 72 
Q4GZ56         63 FSPLEKPVDVFFRFREE 79  Trypanosoma brucei
Q4D0K5         63 FLPLEKPVDVFFRFREE 79  Trypanosoma cruzi
Q4QCV8         64 VLRLEKPVDVFFRFHEA 80  Leishmania major
Q4D0K4        112 VPRLENRADVFFKFNEL 128 Trypanosoma cruzi
Q22CJ9         63 IGALDSAIDIYNKWCED 79  Tetrahymena thermophila SB210
Q6BGB4         60 IKGLDEAIDVYHKWLAE 76  Paramecium tetraurelia
WP_012310169   57 MKPGEGKIDAYTRFFDA 73  Candidatus Korarchaeum cryptofilum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap