6IR9


Conserved Protein Domain Family
Elf1

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pfam05129: Elf1 
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Transcription elongation factor Elf1 like
This family of short proteins contains a putative zinc binding domain with four conserved cysteines. ELF1 has been identified as a transcription elongation factor in Saccharomyces cerevisiae.
Statistics
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PSSM-Id: 398683
Aligned: 137 rows
Threshold Bit Score: 52.9409
Threshold Setting Gi: 122017964
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6IR9_M            5 GKRKSsarKPA---PKIKQK-LETQFTCLFCNHDnSVVCTLDKKNS----------IGLLECKKCNLSFQ--APINSLSQ 68  Komagataella...
jgi:Pyrfu_0153    6 GRRRK---RRKkliIRRPT--MPSAFRCPNCEAE-TLVVEINKKEVdqnt---gyyKAIIKCGTCGLQAE--MWVPPIFQ 74  Pyrolobus fu...
imbp:Hbut_0004    2 GRRRR---KYKkrpLLRAPRvLPTVFECPHCGAK-AMTVEIKKKERneq----gyvKAIIRCGNCSLYAE--MWAPELFQ 71  Hyperthermus...
jgi:Calag_0529    3 RRRRK---KSLk--PKKPRH-PSRYFQCPRCGSV-TLTIDFAKIGGned-----ekMAIAKCGNCHLYCE--LKVPRVLD 68  Caldisphaera...
CBRAS:ASAC_1044   6 RRRKR---RIKq--VKRVRK-PSRYFQCPRCGAM-TLTVDFKKLDSan------ekLAIARCGTCHLYCE--LRVPITLD 70  Acidilobus s...
WP_014736989      2 GKRRK---KYKr-vVKRIPK-IPTVFQCPRCGAK-TLSIKFEKLDTpg------fkRAIISCGSCGLYAEypQPVPEILQ 69  Thermogladiu...
jgi:Tagg_0822     2 GRRKK---RRKi--QKRVVR-IPSVFQCPNCGSV-SLSVEFSKADEpg------ykTARISCGRCGLRAEypSPVPDLYQ 68  Thermosphaer...
CBRAS:DKAM_1192   2 GRRRK---KRKi--IKKAVR-IPVLFQCPNCGSP-TLSVTFRREDSs--------rKAIISCSRCGLYYEy-NNVPSIYQ 65  Desulfurococ...
jgi:Smar_0992     2 GRRRK---KYRk-pIRKVRK-IPKIFQCPNCGSK-TLTIRLEKLNIpg------ykKAIITCGTCGLHAE--MQVPELYG 67  Staphylother...
Q9YEF3            2 GRRRR---KRMrrqVRTVPQvYKRYFTCPRCGSL-TLSITLTQAKDeegnvkagvkRAVAVCGNCGLRCE--MEVPEGLE 75  Aeropyrum pe...
6IR9_M           69 PIDIYSDWIDACEA 82  Komagataella phaffii GS115
jgi:Pyrfu_0153   75 PVDVYSKFLDGFLE 88  Pyrolobus fumarii 1A
imbp:Hbut_0004   72 PVDVYSKFLDAYLE 85  Hyperthermus butylicus DSM 5456
jgi:Calag_0529   69 RVDVYNKIVDLSYd 82  Caldisphaera lagunensis DSM 15908
CBRAS:ASAC_1044  71 KVDVYNKISDLAYE 84  Acidilobus saccharovorans 345-15
WP_014736989     70 AVDVYAKFLDLYLE 83  Thermogladius calderae
jgi:Tagg_0822    69 AVDVYNKFIDLFEE 82  Thermosphaera aggregans DSM 11486
CBRAS:DKAM_1192  66 SVDVYNKFIDLFEE 79  Desulfurococcus amylolyticus 1221n
jgi:Smar_0992    68 PLDVYAKFIDAFEE 81  Staphylothermus marinus F1
Q9YEF3           76 KVDVYNLVSDAYFE 89  Aeropyrum pernix
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