Conserved Protein Domain Family
Terminase_4

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pfam05119: Terminase_4 (This model is not part of the current CDD release)
Phage terminase, small subunit
Statistics
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PSSM-Id: 516635
Aligned: 80 rows
Threshold Bit Score: 61.1237
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8ED03        46 AkAAWKKLTKLLKDMGVLTLADGMALERLCDVYSEILDLRDEIKQNGRTYQSIKIigenideetkeftqveqmLMKANPA 125 Shewanella onei...
WP_005845290  13 srefiKRVYDHLKENNQLDKIDDAALNMLAVNYSLFLDANKAISEKGLTSKGSRG------------------NDIPNPA 74  Prevotella dent...
CDE61314      14 AkEYMKTVLARLEDSGVLENVDIAALDMLARNYSMFINASKQIERDGATITNVQG------------------NVVKHPA 75 
Q5L2L8        17 AkKLFQILIQELEKENNLNDRTLMIVDNMVLLEQLKQEHMEDIKQRGVMELFKNGsq---------------eMFRENKS 81  Geobacillus kau...
1_pfamImport   1 GkDTWIRIWSVLEGEGKADINDPIVVEAIAFSYQMFREMAANVKKEGLTMEYTNKag--------------atNLTKHTL 66 
Q65KG7         6 akKIREYLGDR------YKESDEELIELYVDTHKFYRRLKKEVAENPLMMRHTNKag--------------aeNLVKNPL 65  Bacillus lichen...
Q81D02        19 rdeerNRIIRLLTEDDNFTPSLEPLIDNYLDAFIIYKTMFEEWKADGFAPTKTHKnka------------gavNEMKHPL 86  Bacillus cereus...
CDB03375       3 aagyeKRIIKKMTAVNTYRPEFDQTIKILAKIYEEFDKAKEQFEESGGEYVITYTnks------------gvsNMIKNPI 70 
Q9CGR0         7 eeTIYKDTIAQMKQLKTYNYAFNRLVRIYAGMVRQYYEALKVWEEEGSPISTLSAs----------------nSTKKHPA 70  Lactococcus lac...
WP_015891209   8 kaavkRTTIRDMKSLGTYKKEYDRIIEIYAELVEQYAILNERFASEGYQYEVSTAd----------------gSTKKAPI 71  Brevibacillus b...
Q8ED03       126 VQMLADADRRFKAYLVEFGLTPSARSKVQVTDGDK 160 Shewanella oneidensis
WP_005845290  75 IKIANDAEVQCIKLMEKFGLTPRDRQKMNMLDSED 109 Prevotella dentalis
CDE61314      76 VTIAKDAQIQAVKIMQEFGLTAKSRTKLPKLDKKE 110
Q5L2L8        82 VDKILKIVEQQRKLQAELKLTPASEKKVTEvvevd 116 Geobacillus kaustophilus
1_pfamImport  67 IPEIPKYLQQIRQYLGELGLTGASRKKLQEELTGD 101
Q65KG7        66 AIELTKTVTTLNNLLKSLDLTPAQRKELNAGGEEN 100 Bacillus licheniformis DSM 13 = ATCC 14580
Q81D02        87 AQQVETWNDKKNKMLEALGMTNKGKSVQKTPKNAE 121 Bacillus cereus ATCC 14579
CDB03375      71 YKIIEDMEDRILAYNRELGLTPVGYKRIMNKFEKE 105
Q9CGR0        71 LDQIEKLRKDILSYSNQLMLNPKSQRDSETKPEEk 105 Lactococcus lactis subsp. lactis
WP_015891209  72 VATLESLRKDILAYTDRLCLNPKTIDGIKIEKKkt 106 Brevibacillus brevis
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