Conserved Protein Domain Family
LEF-9

?
pfam05094: LEF-9 
Late expression factor 9 (LEF-9)
Late expression factor 9 (LEF-9) is one of the primary components of RNA polymerase produced by baculoviruses. LEF-9 is homologous to the largest beta-subunit of prokaryotic DNA-directed RNA polymerase.
Statistics
?
PSSM-Id: 282891
Aligned: 2 rows
Threshold Bit Score: 939.79
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q91ET8   6 I-EFRRRDATTVSILKDIHSLSRCMLMSSELFGKFVRDLLNCLKQS-KCTYYNSMIGQLITIYQENELNNetTKGDDYTK 83  Cydia pomonella granu...
Q8B9J0  30 MfSFLDKTPTEFDLILDPHKLQNVAFFTNEEFKVILKNFITDLKKNqKLNYFNSLIDQLINVYTDASVKN--TQPDVLAK 107 Rachiplusia ou MNPV
Q91ET8  84 TLASALladnIIVTDIEESVFLKKLKINKFTDTIDYLILPNFNLWDHNYLVFLNKKFNSKKMGGLVNVWGAMQKIPLTQG 163 Cydia pomonella granu...
Q8B9J0 108 IIKSTC----VIVTDLPSNVFLKKLKTNKFTDTINYLILPHFILWDHNFVIFLNKAFNSKHENNLVDISGALQKIKLTHG 183 Rachiplusia ou MNPV
Q91ET8 164 VIKDLIQNKNGYAGQYLYSTFLNTSSIYANVQCFNGVNEIIPPKMSVERYYGRPVKNVRVWNTRHPNISQLSTQFSRV-I 242 Cydia pomonella granu...
Q8B9J0 184 VIKDQLQSKNGYAVQYLYSTFLNTASFYANVQCLNGVNEIMPPRSSVKRYYGRDVDNVRAWTTRHPNISQLSTQVSDVhI 263 Rachiplusia ou MNPV
Q91ET8 243 QRDEINWNVKVGLGTFVGANRDCDGDKEVITYLPHPNSLIELESLMYCDPKYSFLCFDKNKLTFVSQQVLYLHKNMHRIE 322 Cydia pomonella granu...
Q8B9J0 264 NESSTDWNVKVGLGIFPGANTDCDGDKKIITFLPKPNSLIDSECLLYGDPRFNFICFDKNRLSFVSQQIYYLYKNIDAME 343 Rachiplusia ou MNPV
Q91ET8 323 REFKAYPEIYKLWCLHRNTTLAQRLERFFTDVALVFSSNMTTLLFKKLCEMIDNESVVCSDRDVFDLEGCFEDVIESGAK 402 Cydia pomonella granu...
Q8B9J0 344 ALFKSTPLVYALWQKHKHEQFAQRLEMLLRDFCLIASSNASYLLFKQLTQLIANEEMVCGDEEIFNLGGQFVDMIKSGAK 423 Rachiplusia ou MNPV
Q91ET8 403 GSRNLIENTKQYSGTRETDVGVVAERAINGLNSHITSHGRVKFSGGDIYHNTVIFLNLFLHNNSICYKQNTLSLGSIAHL 482 Cydia pomonella granu...
Q8B9J0 424 GSQNLIKSTQQYRQTLNTDIETVSSRATTSLNSYISSHNKVKVCGADIYHNTVVLQSVFIKNNYVCYKNDERTIMNICAL 503 Rachiplusia ou MNPV
Q91ET8 483 PEQFLFPTHLLDT 495 Cydia pomonella granulovirus
Q8B9J0 504 PSEFLFPEHLLDM 516 Rachiplusia ou MNPV
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap