6B0X


Conserved Protein Domain Family
Phage_capsid

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pfam05065: Phage_capsid 
Phage capsid family
Family of bacteriophage hypothetical proteins and capsid proteins.
Statistics
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PSSM-Id: 398646
Aligned: 72 rows
Threshold Bit Score: 89.765
Threshold Setting Gi: 122955107
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6B0X_A         41 NefTTPILQEVMENSKIMQLGKYEP--MEGTEK-KF-TFWADk--------pGAYWVG-----Egq-kiETSKA-TWVNA 101
ABV63423       25 AtqSNTFIRMMQNTPTVLNDARIIPmeSDSQKIeKIgFGQRI----------LRPAEEgqaldA-----KDRVVpATSTV 89  Bacillus pumil...
jgi:Cthe_1719 133 NefINDLFESMMAQSQVANRIRMIPigANTNRLrALgIDENSrangsrwggvQAYWVA-----Eae--tAAQSKpKFREI 205 Hungateiclostr...
CAL77406      146 TewREQIWSLVFADNDLLGFCNPEP---TQGNTvGI-VKDETtpwg--aagvQAAWRS-----Egt--qMIASKaALTPE 212 Bradyrhizobium...
jgi:Bphy_7144 143 PqfASEIFTLSLEEQALLPMTDSTP---ISGNSmVFpKDETTpwgt---dgiRAYWQA-----Eas--vATATKpKLGVS 209 Paraburkholder...
Q81Z09        126 QtvLDKIIEKIEAVGMILPLITRTA--IKGGVTvPT-SAVKP----------VATWVA-----Ess--gSDKQKkTTGSI 185 Bacillus anthr...
EDK34970      158 EavIDMIQARLGDYSALYSEVYVQPl----TGTaRI-IMDGAi--------pEGIWTE-----Mtd--aVQELSaGFSQT 217 Clostridium kl...
WP_012574350  152 EvvVNRIMDIMGDYTTLYPLVDKIR---V-KGTtRI-LVDTDt--------sPAVWIE-----QagalpTGDVG-TIASV 212 Anoxybacillus ...
Q2FX56         41 NdfTTPILQEVMENSKIMQLGKYEPmeGT-EKKfTF-WADKP----------GAYWVG-----Egq-kiETSKA-TWVNA 101 Staphylococcus...
WP_000854835  108 KhsATDIRPTFNEVSTLIDRVSSKTlkGGESYQqPY-IKSYG----------EGDYTT-----EgndynTSET--TFGYA 169 Bacillus anthr...
6B0X_A        102 TMRAFKLGVILPVTKEF--LNYTYSq--FFEEMKPMIAEAFYKKFDEAGILNq---gNN----PFG--KS--IAQSIE-- 164
ABV63423       90 HLNAKEVIAEIHMTYDS--IENNIEkdgIQQTIMQMLAERAAVDIEELIVNGdttssDPflaqMDGv----rKQAVTH-- 161 Bacillus pumil...
jgi:Cthe_1719 206 EMSLQKLLALCYVTDDL--LQDTTA---LEAIVRQAYADEMSFKIDDAIING-----TGvg-mPLGi-----lNSDAL-- 267 Hungateiclostr...
CAL77406      213 ILQLHELYAFVLATNEV--LDDAPR---LQNRITVQAARAIRWKLFEAVCFG-----DGng-kPLGf-----mASPAL-- 274 Bradyrhizobium...
jgi:Bphy_7144 210 TNRLHKLMALVPVTDEL--LDDASA---LASYLPGKTAASIRWKTDESILFG-----TGag-qPWGv-----mKSGAL-- 271 Paraburkholder...
Q81Z09        186 TFNYHKLRCAVAVSLEVetMSLAVFe----TTLINNIVEAMTKAIEQAIVSG-----DGsg-kPKGilAEtp-------f 248 Bacillus anthr...
EDK34970      218 ELDGFKVGGFIPVANAI--LEDSMIn--LANYIETRLSMAIAKALDKAILTG-----AAaskqPTGi----iTALGGTgl 284 Clostridium kl...
WP_012574350  213 DFDGFKVGKVTFVDNYL--LQDSIIn--LDEYVTKKIARAIAKALDLGIVKGt---gATnk-qPLGiiPSlpA-QNQVti 283 Anoxybacillus ...
Q2FX56        102 TMRAFKLGVILPVTKEF--LNYTYSq--FFEEMKPMIAEAFYKKFDEAGILN-----QGn--nPFGk----sIA-QSI-- 163 Staphylococcus...
WP_000854835  170 DITKAKVTAYSEDTEEL--QKLPAAd--YDAEVMKGITVATRKKLTREILIG-----TGatnrLVGifS---AAATAI-- 235 Bacillus anthr...
6B0X_A        165 -KTNKVikgd----ftqDNIId----LEA-LLEDDELea----naFISKTQNR-SLLR--KIV---DpETKERIYdrn-- 222
ABV63423      162 -IVDANg----------AEISrqmlkQAYkAMPSKYLrvpq-dfrFYTSPSLEvEWKD--QVAnrqT-TLGDAVIqgg-- 224 Bacillus pumil...
jgi:Cthe_1719 268 -VTVPKekdqgagtikyENIL-----KMWsSMPARLRan----avWYINQEIE-PQLY--TMAlniG-AGGAPVFmpsgg 333 Hungateiclostr...
CAL77406      275 -VTAPAeggqsagtivtANIL---------KMMARLFempggnpiWLANRDTI-PQLG--TMT-----IGNNAAFlpvnq 336 Bradyrhizobium...
jgi:Bphy_7144 272 -IVVAKdsgqatntltpTNIS---------NMISRLPvgsfgrsfWLINPDVL-PALD--NLT-----LGNYPIYmpvgg 333 Paraburkholder...
Q81Z09        249 eGQALDv----------AKINyktltDAEaALPLEYEas----aiWTMTKKTF-MEFS--AMT---D-ADGQPIArtnyg 307 Bacillus anthr...
EDK34970      285 eAHNVTs----------DGTLknivsHMSvIDDGEDGapig-eviAVMKRSFYySQIApqTFL---PtSDGRLVIqtaq- 349 Clostridium kl...
WP_012574350  284 ead----------nnllKNLVk----QIG-LIDTGTDsvg--eivAVMKRSTYyNRLV--EFSiqvD-SNGNVVGklpn- 342 Anoxybacillus ...
Q2FX56        164 -EKTNkvikg---dftqDNIId----LEAlLEDDELEan-----aFISKTQNR-SLLR--KIV---DpETKERIYdrn-- 222 Staphylococcus...
WP_000854835  236 -DSETDleisaidastlDEIIy----SYG--GDEDVEda----avLILNKLDL-KSFA--KLR---T-SDGKKVYnvvsq 297 Bacillus anthr...
6B0X_A        223 ---------sdSLDGLPVVNLkss--------nlkRGELITGDFDKLIYGIp-QL-IEYKIDETaqlstvknedgtpvnl 283
ABV63423      225 ---------lsSAFGVPVKGLanmqty--deagtdVSDILLTHPKNIIVGFs-RH-IRIEVEKD---------------- 275 Bacillus pumil...
jgi:Cthe_1719 334 a----aasqysTLLNRPIIPIeqcs------plgkKGDIILADPTQYIGIDk-KG-LTSDVSIHv--------------r 387 Hungateiclostr...
CAL77406      337 al--tgspfknTLAGDPLLFNehcq------tvgtTGDIVLADLSGYALATkqGGgIDFAASIHl--------------f 394 Bradyrhizobium...
jgi:Bphy_7144 334 gdraaggspygMLKGRPIVLSehas------pfssQSDISLLDLSYYRSITs-RGgIQTATSMHv--------------y 392 Paraburkholder...
Q81Z09        308 i----sgkperILLGRPVVLCnyvdsf--atategTAFAFLFNYKDYILNTn-YQ-MGVKKYED---------------- 363 Bacillus anthr...
EDK34970      350 --------sprLPDGTRIVFSqy----------mpANTILLGDFKKYLLGEr-KG-VQLAVSDQv--------------r 395 Clostridium kl...
WP_012574350  343 -------lripDLLGLRVVFNnf----------ldDDTVLFGEFQQYTLVEr-ES-ITIDSSTHv--------------k 389 Anoxybacillus ...
Q2FX56        223 ---------sdSLDGLPVVNLkss--------nlkRGELITGDFDKLIYGIp-QL-IEYKIDETaqlstvknedgtpvnl 283 Staphylococcus...
WP_000854835  298 -------gnsgTIDGVPFIINsackavsdakttagqYSMAYGPLSNYQLTIf-SD-MDVQRSTDf--------------k 354 Bacillus anthr...
6B0X_A        284 FEQDMVALRATMHVALHIADDKAFAKLV 311
ABV63423      276 IRSRKFIIVLTAKLDSKFEEEDAV--AK 301 Bacillus pumilus SAFR-032
jgi:Cthe_1719 388 FLYDEQVFRFIYKFNGMPYKNKPIMPYK 415 Hungateiclostridium thermocellum ATCC 27405
CAL77406      395 FDQNLTAFRWIIRAGGQPYLSKPVQPAK 422 Bradyrhizobium sp. ORS 278
jgi:Bphy_7144 393 FDADATAFRTTFRVDGGPKIENAITPPK 420 Paraburkholderia phymatum STM815
Q81Z09        364 NETDDQVTKAIMIVDGKVVDKNSLVVLK 391 Bacillus anthracis
EDK34970      396 FIEDQTVFKGTARYDGKPVYPSYFVKIT 423 Clostridium kluyveri DSM 555
WP_012574350  390 FTEDQTAFRGKGRFDGKPVKPEAFVLVT 417 Anoxybacillus flavithermus
Q2FX56        284 FEQDMVALRATMHVALHIADDKAFAKLV 311 Staphylococcus aureus subsp. aureus NCTC 8325
WP_000854835  355 FKQGMIAHRGSVFAGGNVISKNGFLRVk 382 Bacillus anthracis
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