Conserved Protein Domain Family
Nsp1_C

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pfam05064: Nsp1_C (This model is not part of the current CDD release)
Nsp1-like C-terminal region
This family probably forms a coiled-coil. This important region of Nsp1 is involved in binding Nup82.
Statistics
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PSSM-Id: 516607
Aligned: 18 rows
Threshold Bit Score: 141.678
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5B4N1       389 LGASTAG-PPppaqsrLKNKTMDEIITRWATDLTKYQKEFREQAEKVAEWDRMIVENGSRVQKLYGSTVDAERATQEIER 467 Aspergillus nid...
Q6CFX8       330 ASAQPVStSN------LKNKSMEDIISKWTTELSTQSEEFRQQAQDIMEWDKVLVDNGDKISDIYAKVIQTEQTQTKVDQ 403 Yarrowia lipoly...
XP_001646100 589 LNSKEVE-IKpi---sLDNKTLDDLITKWTEQLSGAATHFNEYSNKINQWDETLVKGGGLISKLYSDTLVAEQTQNKIDQ 664
Q6FPU8       663 LESKPVE-VKpv---sLDNKTLDDLVTKWTNQLSSASKHFDQYSKRITDWDRILVDGGKQISQLYTEAVNAEQAQNKIDQ 738 [Candida] glabrata
Q2HEA0       394 LSASTMG-PAsql-prLKNKTMDEIITRWATDLSKYQKEFKDQASKVAEWDRMLVENGEKIQKLYTSTYEAERANAEIDR 471 Chaetomium glob...
Q7SEK6       442 LASTTTG-PTstl-prLKNKTMDEIITRWATDLSKYQKEFKSQAAKVAEWDRLLVENGEKIQKLYTSTYEAEKASNEIER 519 Neurospora crassa
Q0U9D0       462 LANSTAG-PPpsaqsrLKNKSMDEIITRWAADLSKYQKEFQTQAETVAKWDRALVENSDKVRQLYSKTFQAERDAAEVER 540 Parastagonospor...
XP_001629560 283 ASAVPT--ALtstapqLTYKQLEDHINKWALELEDYERTFLDQAAQVNAWDRLLMENGEKITELNSGVESVKAEQKRLDE 360
XP_011390840 478 AVATPSL---------LRGKSMDEILNRWSVSLDSSIKEFSRQAAEVAAWDKVLLKGGDEISALVSALGAAEEKQAGIER 548
Q5KIE7       514 NVEKPSE-PVpn---lLRGKALDDIVEGWNKDLEEQVKEFERQAGEVREWDKILVRNGNQITALRRQVLEAQQTQAAVDE 589 Cryptococcus ne...
Q5B4N1       468 QLASVEGQQDELSSWLDRYEREVDEMM-SKQVGPGEslq--gpDQE 510 Aspergillus nidulans
Q6CFX8       404 LLQYVGKQQDDLESLLTGYEEEASRLL-GDLAGTDGlq---pvDQE 445 Yarrowia lipolytica
XP_001646100 665 SLQYIERQQDELETFLNNYEKKTETLL-SEILSANS-------GSA 702
Q6FPU8       739 SLQYIERQQEELETFLDNYESRTEALL-SDILPSNS-------GVP 776 [Candida] glabrata
Q2HEA0       472 QLSNVESQQDELGAWLDRYEADLNELF-AKGPGAGGavseqaaGPD 516 Chaetomium globosum CBS 148.51
Q7SEK6       520 QLSGVESQQDELTAWLDQYEAQLEELF-KKQQLGSG-------GES 557 Neurospora crassa
Q0U9D0       541 QLTMMEENQQELDSYLDRYEKEIENLMkMHGVSGKS-------DGL 579 Parastagonospora nodorum SN15
XP_001629560 361 ELNFISAQQRELEDLLKPLEDELKKNSvGTSQLQHA-------DRE 399
XP_011390840 549 TLDYLESSQSDLTSLVTDYEAQIESLL-PGLTSQINlt---saDVE 590
Q5KIE7       590 PLNYFEAQQNQLESMLDVYEKEIAKMS-NDSTRPLA-------AKM 627 Cryptococcus neoformans
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