Conserved Protein Domain Family
NosD

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pfam05048: NosD 
Periplasmic copper-binding protein (NosD)
NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.
Statistics
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PSSM-Id: 398638
Aligned: 51 rows
Threshold Bit Score: 88.2425
Threshold Setting Gi: 121725257
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8TI41   43 LHATSVGDEVFVYNgt-----yNN--------ESNDIvqfykSNTMLVGEGADVvtidCNNKNAGIAVSIytgcVVEGVk 109  Methanosarcina acet...
A0B8G3  432 EGNIIRQGSsgvl---------------veasDGFAA-----VDNTFDGVPRAIt---ITASHGSRVSNS----SITGA- 483  Methanothrix thermo...
Q0W3C2  236 SDNLMQLNGGTVARdggahvyrLGdgvqlkntRDSVV-----KDNVMIDDHYAVw---IDASENATVTGN----IASGE- 302  uncultured methanog...
Q0W3C3  195 SDNTMKQNGGTITRqpgnrvyrLGdgvqlyetRDNVV-----KNNVMIDDHYAVw---IYKSTNCTVTGN----VASGE- 261  uncultured methanog...
Q2FPE3  417 CNNLHAERNLVsgyy-------------isntNNFTL-----TSIYGQESPSGI----YLHNATGGILKNiymtQITGLk 474  Methanospirillum hu...
Q8TPZ7   43 VNSASSGDTIYVYAgtynefavPIpyltikgeGPDLV-----TVNGIIDIPQTA----TYANATGTVLE----------- 102  Methanosarcina acet...
Q8TSE8   43 VNSASSGDTIFVYSgtysgfyvNIpylsiigeGADVV-----TVGSSIYLPEGSs---AWQNATGTVLQE---------- 104  Methanosarcina acet...
A0B5Z3  119 MDCQVSGNRygiv---------------lsfaEGCTLe----NILAEASSEAGMl---LDNSTKNSIIGC----KLENN- 171  Methanothrix thermo...
Q8TN36  103 NSNSVTIDGFYILGyqsg-tdgSEagihlegvQDCSL-----SNNTLVFNGQGIl---LNDSQGNYLDSN----LVNLG- 168  Methanosarcina acet...
Q8TPF2   96 NSSNVTIDGFFISGvssg-gdkYEvgiylegvENCSL-----SNNALIMNDVGIs---LTGAKENYLVNN----LVSLG- 161  Methanosarcina acet...
Q8TI41  110 vvnsKFGIRLDTSNH------------TVRDCVFDGMTysDGTLMTDGAdn-cLFENNRLINSTGm----YSAMSIYCHN 172  Methanosarcina acet...
A0B8G3  484 ----DTAILVNSSEEv-----------VVEGNSMSNST--EGIRLLASYd--tEIAGNVITGAKN------GIILDESNE 538  Methanothrix thermo...
Q0W3C2  303 ----YYNVIVENSRDc-----------LIADNVLSRSG--RNIRLLNAHn--cTLRNNTMSGGMY------DLTLTDSWY 357  uncultured methanog...
Q0W3C3  262 ----YYNIMVEQSHRn-----------TIADNTVSKGG--RGIWLDYASy--nTVRGNKVSGGGNsewstYLVTLSNAWY 322  uncultured methanog...
Q2FPE3  475 s-rmPSGITLSGCDSi-----------TVSKSQFSECSy-AGLVSDSDNl---NLTDNRFLSNTYa----GSVILSGPVD 534  Methanospirillum hu...
Q8TPZ7  103 ------GMKITTAPNiqsvtg-tasdiTIRDCVFDGLT---SVNLHVNT----IFENNIIINNTN-----KG-LELKADN 162  Methanosarcina acet...
Q8TSE8  105 -------MKITASPMigysslgtvsdiTIRDCTFEGIS--SSIAVYLRStnrvVFENNVISNCTG-----NNALVAKGDS 170  Methanosarcina acet...
A0B5Z3  172 ----IHGIRLVSSESn-----------TIRGNIISNTTf-EALSLERSSnr-nLIEDNIIRFNQI------GISLETSRG 228  Methanothrix thermo...
Q8TN36  169 ----DCGIALGDSEDn-----------ILSNNIVVTNK--QGISLHNSVn--nTLVKNIADSNTI------GVFLGMSHG 223  Methanosarcina acet...
Q8TPF2  162 ----YQGIALENSEDn-----------TLLGNLMLTND--MGILLYNSAn--nTLMNNTADSNTK------GVSLEASDM 216  Methanosarcina acet...
Q8TI41  173 SSILNNTF--TdNSGAGFTVCVQaDGNIIAYNNFTSNg-----YAGIEf------------------YSAGEGNKVYLNN 227  Methanosarcina acet...
A0B8G3  539 NTIEENNI--S-RCNSGITLSRS-WRNVLMMNNISYNtnglvlDEGMY-------------------PIESSENQIYLNS 595  Methanothrix thermo...
Q0W3C2  358 NTIEDCTWsdSaPGYQSLWLSNS-SYNLLTRNSAYDN------GEGIW-------------------LERSTSNRLYLND 411  uncultured methanog...
Q0W3C3  323 NTLEENVIsdSsYVYNALWLTNS-SYNTLKGNRIANT------GGPLM-------------------IDSSKNNRLYLND 376  uncultured methanog...
Q2FPE3  535 --LYNNSF--LnNEDTGLILRA--NQSTILRNTFTNNk-----NRGIL-------------------LISGNENLFAYNT 584  Methanospirillum hu...
Q8TPZ7  163 SIIVNNTI--KnSKDSAIWFNAA--NTTVKNNHIESN------GYAFYf------------------RDAGDENKIYLNT 214  Methanosarcina acet...
Q8TSE8  171 CIITNNSIq-NnKNAYAIVFYQA-TNTTVKNNHIESN------NIGFYf------------------NNAGNENKIYLNS 224  Methanosarcina acet...
A0B5Z3  229 NNITRNLA--S-NNSVGIKIAN--HNDTESISPIENPg-----KYGGVsikykpnsdiksydvrdkdLSSYTTNTIYNNT 298  Methanothrix thermo...
Q8TN36  224 NKLAYNHI--L-TNEYGISGQAA-GHNTLVDNSLYLN------GIGVY-------------------LNESSDNTLYRNE 274  Methanosarcina acet...
Q8TPF2  217 NALTSNTI--S-KNEYGIFTLKS-KSNVLFNNSLYLN------GVGAY-------------------FNDSSDNTVYMND 267  Methanosarcina acet...
Q8TI41  228 FiGNGVTATTSGTAvpaLTYWNSTEPI-DYTYNGATYSGhlGNFWgSAYTG 277  Methanosarcina acetivorans
A0B8G3  596 FvQNRNDVVSYIS----SNFWSSPT-SiRYIYRGRSFESrmGNYW-HGLEG 640  Methanothrix thermoacetophila PT
Q0W3C2  412 FlDGVYSASP-------GNYWNTSQPE-TYYYTGNAYTGylGNHY-GDYSG 453  uncultured methanogenic archaeon
Q0W3C3  377 FlDGVSSGGS-------GNYWTSPGTM-TYQYNGVTYTStvGNKY-KDYSG 418  uncultured methanogenic archaeon
Q2FPE3  585 F-KNYKNCMIQDKNa--INIWNTSN----MYFSDNTYPA--GNYW-GDPEG 625  Methanospirillum hungatei JF-1
Q8TPZ7  215 IsNNSEITKIRGTLp-sITYWNSTTPI-KYTYNGTTYTGymGNYW-SDYNG 262  Methanosarcina acetivorans
Q8TSE8  225 LsNNSQSVKVAGTVp-sITYWSSPDQI-LYTFNSTTYTGymGNYW-SDYTG 272  Methanosarcina acetivorans
A0B5Z3  299 LiNNEENAIDDG-----NNQWDNGTl---------------GNHY-SDFDE 328  Methanothrix thermoacetophila PT
Q8TN36  275 F-INLLNAVDKG-----NNFWNSSSe---------------GNFW-NDHTG 303  Methanosarcina acetivorans
Q8TPF2  268 F-VNYINAEDEG-----TNFWNTSSt---------------GNYW-DKYSG 296  Methanosarcina acetivorans
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