2A6T,5LON


Conserved Protein Domain Family
DCP2

?
pfam05026: DCP2 
Click on image for an interactive view with Cn3D
Dcp2, box A domain
This domain is always found to the amino terminal side of pfam00293. This domain is specific to mRNA decapping protein 2 and this region has been termed Box A. Removal of the cap structure is catalyzed by the Dcp1-Dcp2 complex.
Statistics
?
PSSM-Id: 398619
Aligned: 92 rows
Threshold Bit Score: 65.2247
Threshold Setting Gi: 829189593
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2A6T_A        15 QVLDDLSARFILNLPAEEQSS---VERLCFQIEQAHWFYEDFI--RA----QN----------D-Q---LPSLGLRVFSA 71  fission yeast
XP_004355649  77 dILTSLADTFIT---ENNFSS---FEDLFMFIEEAYWYYIDIHliQN----------------P-R---LPKPDFPKFAE 130 Cavenderia fasc...
XP_001582381   6 KILEDIAVRFIINQPYFEEGAkidLFDLYIQFEQAYWHYIDFYsnKFhkknQDsikdkyktfiKeLiqlIPP--LQPFES 83  Trichomonas vag...
OWR51497      18 DILDDLCSRFIINLPPEDKAN---LVRICFQIELAHWFYLDYY--CT----DEs---------T-R---LNPCGIREFAA 75  Danaus plexippu...
XP_968428     16 DILDDLLTRFIICVPESAKQN---LIRICFQIELAHWFYLDFY--VT----SE----------S-K---LKTCSIYEFAA 72  red flour beetle
EFN68651       8 DILDDLSSRFIINVPEEERKD---LVRICFQIELAHWFYLDFY--CT----EEn---------P-K---LRSCNMKEFAT 65  Florida carpent...
EFX86250      26 DILDDLCSRFIVNVPEEERKD---LVRLFFQIELAHWFYIDFY--CS----EEn---------S-T---RKQCNIKEFSA 83  common water flea
1_pfamImport   1 EILDDLCSRFIINVPEEERND---IIRLCFQIELAHWFYLDFYtrGL----RD----------------KKTCGIKEFAF 57 
EEC00700      12 gILDDLASRFIINIPEEERRD---PIRLCFQIELAFWFYLDFH--CP----ED----------P-A---LRPCTMREFTQ 68  black-legged tick
XP_002426226  13 EILDDLSSRFIVNVPEEERKE---PIRLCFQVELAYWFYLDFF--CT----ED----------P-N---LKTCGMKEFTA 69  human body louse
2A6T_A        72 KLFAHC--------PlLWKWskVHEEAFDDFLRY 97  fission yeast
XP_004355649 131 QILKNNerlfplheAlLSt--tTYEEMIKRFESF 162 Cavenderia fasciculata
XP_001582381  84 KILNA----------------------MPNFDKF 95  Trichomonas vaginalis G3
OWR51497      76 HIFQHV--------PtLREHirNLDEVLDNWREY 101 Danaus plexippus plexippus
XP_968428     73 HVFQHI--------PsLQKErhKLNQILAEWKEY 98  red flour beetle
EFN68651      66 HIFQHI--------PfLKPHvqHIDAVLEQWREY 91  Florida carpenter ant
EFX86250      84 NIFKHL--------SfLHKYipNFERHLEQFREY 109 common water flea
1_pfamImport  58 QIFRHI--------PyLQPYacNVAGIIDQWKGY 83 
EEC00700      69 MVFQHV--------PsLRDHlpNTDSIIERWKEY 94  black-legged tick
XP_002426226  70 QIFEHI--------PfLTPLlkNLDKVIDDWRMY 95  human body louse
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap