Conserved Protein Domain Family
CFA20_dom

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pfam05018: CFA20_dom (This model is not part of the current CDD release)
CFA20 domain
This domain is characteristic of cilia- and flagella-associated protein 20 (CFA20). CFA20 is a cilium- and flagellum-specific protein that plays a role in axonemal structure organisation and motility. In Chlamydomonas reinhardtii, it stabilises outer doublet microtubules (DMTs) of the axoneme and may work as a scaffold for intratubular proteins, such as tektin and PACRG, to produce the beak structures in DMT1. Other proteins contain a domain with homology to CFA20. WDR90/POC16 contains such a domain in its N terminus, followed by a large C-terminal domain with multiple WD40 repeats. This domain is also present in the N terminus of uncharacterised protein C3orf67.
Statistics
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PSSM-Id: 516574
Aligned: 30 rows
Threshold Bit Score: 171.627
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGI71076        1 MLKNTFR--YMPLLYSIANKPLHLWSKhVSFGGKVRRVSDNQLHGdKVIEITGphDNTIPTNITIPAKALD--------- 69  
XP_004992541    1 MSGKAWQlpLVDVFKHFGAGDWKQCSR----SGEVNRVMDKILRT-NVYRISG--SVPASNYMQFPKATSQ--------- 64  
A0E0P2          1 MN---WQhpFVDVFKQFGVFEIAHTQS----KGQVSVVQDNSIGR-KIIRLLG--AISANNMVQIPDPCQGi-------- 62   Paramecium te...
A8JAN3          2 SLAPEWQhpFVNIFKLCDVDTMREFET----KGDVTEHIDKIIGK-KVFKIRG--MIPAGNYLRVPRTKLQ--------- 65   Chlamydomonas...
4_pfamImport    1 MGGr-----FVEIFSAQGKNPGAKWKI-FGNPSAISKEYDKELKG-FVFVLEG---NSLTNKMKLPRETKQ--------- 61  
XP_002423744    1 MFSKVYQpgLICIFDADNEKPLKIWEK-KIQDGSVKRILSDEIRG-LVLEISS--KMPMSNYIYCPSNIKQ--------- 67  
XP_002423745    1 MTDFYMSpgFTCIFHSVNKHSLAKWEK-KIRNGTIKKLRDDELCS-QVLEINA--PKMAATYIMCPADPNQ--------- 67  
Q4S6P9        119 VAGHDYIrgIQSILNSIDKDPLRFWRK-KVESGHVESVMDEDIRS-SAIEVQG--RNMQNNFITCPVDPEG--------- 185  spotted green...
XP_011153412    8 G--------YISLLYSVAGKPLDLWSKhVSLGGKIRRVSDDMLHGdRVIEIVGphDSIVSTSITAPAEVVN--------- 70  
6_pfamImport    1 MFAQTCQsgFISLLYSIGARPLQLCEKhEETPGSIRRVLDDEVQS-SVVELLA--DNLVHTWIRFPSASDEdqeqqqlss 77  
EGI71076       70 -----ILNIKLPILILIVK-NLNLWFKLEVQI-IDKQQYRRRFSFMTYnvEKLPSINASIARIPLRLDDC--WNFLEINL 140 
XP_004992541   65 -----SLGLVGRFVYIQYRpaRDKPFVIHLEA-AVKGGVVIRVSFSNL--YKEFKATSTWLQFPV-VNMPlqWTLFVIDL 135 
A0E0P2         63 ----kQLGLTGRYIYIEFIpiKGRYFTIHFDLqIKDRDPLIKLTVSNM--YDVHKVQQSQLLIPYPKNAPnkWTILILDV 136  Paramecium te...
A8JAN3         66 -----TLGLTGRLLYIQLKvtPIKVFAIHIEV-VTEDHNIHRISISNMynPESMKRKSNGVQLPFPKPSHr-WCVLAVDL 138  Chlamydomonas...
4_pfamImport   62 -----TLGLVQQFLTLQIFvPLGKDFSTELLI-TDFDNIKRRLYLSTV--HKELSVTPLHAKIPLFMIKRkiWCNMCIDL 133 
XP_002423744   68 -----SLNIYYPYLHLTVKlSYSSIFAFDVLI-IDDENVKRRFRISTI--QTFVDIQPFMCKLPLSLESG--WNEITVPL 137 
XP_002423745   68 -----VLKIKNPILNMTVK-NLNKYFAFDVQI-LDDKGVKRRFRASTH--QNVTEVKPFYTKLPLTLEEG--WNQINFPL 136 
Q4S6P9        186 -----SLGIRLPILNMLLK-KTGEDFSFEITV-IDNTNVRRQIVQTTF--KKDMKAKVCVVCFPIRLSDS--WERIDFNL 254  spotted green...
XP_011153412   71 -----TLNIRLPVLVLIIK-NLKSHFKLEVQI-TDKNQYRKRFSFMTYnlEKLPSINASTACIPLKLEEC--WNILEINL 141 
6_pfamImport   78 mpwntSLHIRLQHLVLVLK-NLGQHISLEVQM-ADDQGTRRRFRFSTF--QTKTAVHPQITLLPLRLDEG--WNQLQLDL 151 
EGI71076      141 QTLCHQV--Y-KTDYE------ALQRVTIYQNCHLRRVYLQNRHYN-DDELYRTFFNMY 189 
XP_004992541  136 TMLLSL---YlNRKFV------YLKSIKLCANMSVRGVFTSDQFFK-HTSLPRPMRMFT 184 
A0E0P2        137 EYFLGSFglLpSSLYKsfkgihSLKSFQICSSMNIRGIYTSDNLYD-WDTMPKQMLFKL 194  Paramecium tetraurelia
A8JAN3        139 REALRG---YtSSPFA------SVKAVQTCSWMTVRTMFASDYKFS-LQSLPGDMALSH 187  Chlamydomonas reinhardtii
4_pfamImport  134 AAFTYEI--FkGAYFR------SLDGIIISANCKLRKVFTLK--FKpQDTAEEGTCIVT 182 
XP_002423744  138 HHYVKSI--Y-GTNYS------KTQRVAIYSNCFLKKIYFSDKEYS-DEDIPLEFHIED 186 
XP_002423745  137 QDFTMRC--F-GTNHV------QTLRIQIYASCRLKRIFFSNKILQ-EQDIPLEFRLNS 185 
Q4S6P9        255 AELTNEL--F-GTEYV------ETAKIQIHANCRIRRVYFSDRLYS-NEELPKDFKVNI 303  spotted green pufferfish
XP_011153412  142 QTLCRMV--Y-GTDYE------ALQRMIVYSDCRLRRVYLQDRHYG-HDETPIELCNAF 190 
6_pfamImport  152 VDLALCC--Y-NARYA------HTISVQLHASCRVRRIYFAEQMFS-EAQLPAEFRLYK 200 
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