1VCS


Conserved Protein Domain Family
V-SNARE

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pfam05008: V-SNARE (This model is not part of the current CDD release)
Vesicle transport v-SNARE protein N-terminus
V-SNARE proteins are required for protein traffic between eukaryotic organelles. The v-SNAREs on transport vesicles interact with t-SNAREs on target membranes in order to facilitate this. This domain is the N-terminal half of the V-Snare proteins.
Statistics
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PSSM-Id: 516568
Aligned: 43 rows
Threshold Bit Score: 57.5977
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VCS_A        10 YEQDFAVLTAEITSKIARVPR-LPPD--EKKQMVANVEKQLEEARELLEQMDLEVREI--PPQSRGMYSNRMRSYKQEMG 84  house mouse
Q23YX3         7 YDQNINDMLDNFEKEVKQLDKkDAA---QKKKAIQKNQTYLKSIEQMIQSYKLEVQAL--DRNESAQYTESLKQINSRYM 81  Tetrahymena the...
A0CX93         7 FDSNLNAELDKLQKEIDSLSK-K--EynQKNAAIKKCQAQVKSISTLIESYELEISNL--DKVQSAKYNDSLRSINQRFQ 81  Paramecium tetr...
XP_001324282   7 MKEEIDRIKKDISNAVSNLPQ-YSAQ--ERPSKMQKIEARFGEFDAAINELDLQALMF--DVNDKNAAKKYLVEVRNEYK 81 
A0BIB1        14 YEQDYKAHMESVMHYLLKISN-DRKD--DNNKSFSKVCDRLQQAEQCIKQMELEASTL--SVSYKKELMETVKQYKRDMA 88  Paramecium tetr...
A0E3A1         8 YEVEFEKYQQQVCSLIRQTQI----N--RSDETLKEIASVFTDLQNCLQQMDIESTSI--AVSDRQELKNKVKRYKSETE 79  Paramecium tetr...
EAX87255       6 LVTHLDSHKDVIEQKIERLKSaDPG---SRNSLISEINQDLDNFRNEIKQLSNRLKTA--PQSDKQFYSEDLSNFQNAEN 80 
XP_002551697   8 YEAEFKTTLEQAKTLLSVAPS-QPVS--QRNGTLKEVEQQQDELLDLVDQMEIEVNNGalDNAARSSFKAKLREYKKHVQ 84 
XP_001647355   8 YESDFKITFDQALSALSLAAG-QPIP--QRNASLKQIEQQQDELLDLVDQMEIEVNNSvsDVQERATFKSKLRDYKKRVQ 84 
XP_002493331   8 YSSDIQMTLAEAKRNLANISA--SNSv-DRTRQIRLVEENLDDSYDLLERLNLELQNV--STSDRTKYNVTLRDYQNTLT 82 
1VCS_A        85 K-LETDFKRSR 94  house mouse
Q23YX3        82 R-LKNDFEYKK 91  Tetrahymena thermophila SB210
A0CX93        82 R-LKSELEFKK 91  Paramecium tetraurelia
XP_001324282  82 K-LQNEYTDAK 91 
A0BIB1        89 K-VEKDFKQLQ 98  Paramecium tetraurelia
A0E3A1        80 A-MKKQFRILE 89  Paramecium tetraurelia
EAX87255      81 K-FSQEIKKQT 90 
XP_002551697  85 SdVKSPLQQLM 95 
XP_001647355  85 SeLKEPLQKIM 95 
XP_002493331  83 Q-LKEQLIQRI 92 
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