Conserved Protein Domain Family
Y2_Tnp

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pfam04986: Y2_Tnp 
Putative transposase
Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.
Statistics
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PSSM-Id: 398584
Aligned: 31 rows
Threshold Bit Score: 167.44
Threshold Setting Gi: 150958538
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
zhongguo:Q91_1125     182 GAVTLIQRFGSALNLNVHFHMLFIDGVYQEKH------------NGQlRFHRVNAATTSELNTLVATISQRVAGHLER-- 247 Cycloc...
Q0A7P5                141 GIVMALHTWGRTLNAHPHVHCLISGGGLTTGGqwr-------avKGD-FLLPAAVVKRVFRGKLLSRLRHDLDTGRLK-- 210 Alkali...
jgi:Gura_2394         137 GVIMARHTWGQMLGLHPHVHCLVSGGGLTQSGewr-------svANG-YLLPVRVVRSLFCGKFLDAIRRGVERAELT-- 206 Geobac...
Q328X8                147 GIFCAIHTYGRRLNCHPHVHVSVTCGGLNKHGqw------------kkLSFLKDAMRSRWMWNMRQRLLKAWSEGLAMpe 214 Shigel...
Q877Q5                155 GVFCAIHTYGRRLNWHPHIHVSVTLGGIDDAGvw------------kdLSFHPSALRRRWMWNVRQYLLSQWEHTTVPp- 221 Pseudo...
Q12YW6                152 GAIVVLHPFSKDMGFNPHLHILLTEGRFDMYGkfi-----------hqKFIHFKTMRKTWQYQVLTRFKDA--------- 211 Methan...
WP_011805346          174 GAIAFIHRFGSSLNEHVHFHVCVVDGVFEEVEgegdadatprisSPGvIFHAATGIDAATVAPVQTTLQKRILRAFVA-- 251 Acidov...
jgi:Ajs_4290          182 GAVAFIHRFGSSLNEHVHFHVCVVDGMFEAVAgeaseq-gtrttAISvMFHPAIGIDPEAVTQAQASLRRRILRAFVG-- 258 Acidov...
wugsc:KPN_pKPN5p08199 172 GSVTLIQRFGSALNLNVHYHMLFLDGVYAEDDy-----------GKQ-RFHRVKAPTYDELNTLAHTLSHRIARCMEK-- 237 Klebsi...
wugsc:KPN_pKPN5p08185  69 GAVTLIQRFGSALNLNVHFHMLFLDGVYVEQs------------HGSaRFRWVKAPTSPELTQLTHTIAHRVGRYLER-- 134 Klebsi...
zhongguo:Q91_1125     248 -QGLLVRDDESSYLTLDLQDDdamnqlqghsityriavgpqqgrkvftlqtipswedddfgtnqvgkiaGFSLHAGVATK 326 Cycloc...
Q0A7P5                211 --APRGDHPTVDYWLKATAKK------------------------------------------------EWNVRLQGRYT 240 Alkali...
jgi:Gura_2394         207 -VPDGERPQQVLNLLNKLGRK------------------------------------------------KWNVCIRERYA 237 Geobac...
Q328X8                215 sLSHITTESQRRSLVLKAGGK------------------------------------------------YWHVYMSKKTA 246 Shigel...
Q877Q5                222 eNAHLQSENDWRHLVLNAGGQ------------------------------------------------HWHIHLSKKTK 253 Pseudo...
Q12YW6                212 -LSKVQAFSHLVNQLFKEYPD------------------------------------------------GFYVHMPKNSR 242 Methan...
WP_011805346          252 -RGLLENCDAKDMLGYKHS--------------------------------------------------GFSVDAGVCIE 280 Acidov...
jgi:Ajs_4290          259 -RGLLEGFEAQEMLGYKHS--------------------------------------------------GFSVDTSVCIA 287 Acidov...
wugsc:KPN_pKPN5p08199 238 -RGILERDAENTWLTLEEGEDdtltqlhgasvtyriavgpqqgrkvftlqtlpgredkadsssrvanhaGFSLHAGVMAE 316 Klebsi...
wugsc:KPN_pKPN5p08185 135 -QGLLERDVENSYLASDAVDDdpmtpllghsityriavgsqagr--kvftlqtlptsgdpfgdgigkvaGSSLHAGVAAR 211 Klebsi...
zhongguo:Q91_1125     327 t-RERKKLERLCRYISRPAVSEKRLALTS-QGKVRYQLKTPY---------------RDGTTHVIFEPLDFMAKLAALVP 389 Cycloc...
Q0A7P5                241 --HGRGVAAYLSRYVRGGPITNTRIKSLG-EGQVQFRYHDHR---------------DGRRKLRRVAVERFMEQILWHVP 302 Alkali...
jgi:Gura_2394         238 --HGNGVLTYLGRYLRGGAISNRRIISSD-EEQVRFRYKDYRees---------esgGKKCKTMELSVNDFVRRVLLHVP 305 Geobac...
Q328X8                247 --GGRNTARYLGRYLKKPPIAASRLAHYNgGASLSFRYLDHK---------------TGETATETLTQRELVARLKQHIP 309 Shigel...
Q877Q5                254 --NGKKTVNYLGRYLKKPPISGSRLAHYTsGATLSFTYLDHR---------------TKTYQQETLSQTDMLRRVVQHIP 316 Pseudo...
Q12YW6                243 itNKQRMAQYVGRYIRHPAIANSRLYSYD-GKSVTFWYNDHE----------------GVRHFVTMELQEFIRALIQHIP 305 Methan...
WP_011805346          281 a-HDRAALERLLRYCARPPFSMERLRKEG-SK-LVYRCAKQRsept-------sdkrGAKADELHLTPLELIDRIAALVP 350 Acidov...
jgi:Ajs_4290          288 a-QDRAGLERLLRYCARPPFALDRLRKAG-SE-LIYRCAKQHsepgsdrrdqrkakrGVRADELHLTPLELIDRLAALVP 364 Acidov...
wugsc:KPN_pKPN5p08199 317 a-HQRDKLERLCRYISRPAVSEKRLALTA-NGQVRYELKTPY---------------RNGTTHVIFEPLDFIAKLAALVP 379 Klebsi...
wugsc:KPN_pKPN5p08185 212 a-DERKKLERLCRYISRPAVSEKRLSLTR-GGNVRYQLKTPY---------------RDGTTHVIFEPLDFIARLAALVP 274 Klebsi...
zhongguo:Q91_1125     390 KPRANLTRYHGVLA---PNSK 407 Cycloclasticus sp. P1
Q0A7P5                303 EPGQHTVRHVGLYAh-tCRAK 322 Alkalilimnicola ehrlichii MLHE-1
jgi:Gura_2394         306 EPGHKVVRSYGLYAg-sRRQA 325 Geobacter uraniireducens Rf4
Q328X8                310 EKFFKMVRYFGFLAnrvCGEK 330 Shigella dysenteriae Sd197
Q877Q5                317 EKHFRMIRYFGFLAnrvcgrq 337 Pseudomonas syringae pv. tomato
Q12YW6                306 DRNFKMIRYYGAYSrkvKKRY 326 Methanococcoides burtonii DSM 6242
WP_011805346          351 PPRTHRHRYFGVLA---PNSp 368 Acidovorax sp. JS42
jgi:Ajs_4290          365 PPRAHRHRYYGVLA---PNSP 382 Acidovorax sp. JS42
wugsc:KPN_pKPN5p08199 380 KPRVNLTRFHGVFA---PNSk 397 Klebsiella pneumoniae subsp. pneumoniae MGH 78578
wugsc:KPN_pKPN5p08185 275 KPRVNLTRFHGVFA---PNSr 292 Klebsiella pneumoniae subsp. pneumoniae MGH 78578
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