7Q74,2HHP,4LT6


Conserved Protein Domain Family
PAP_RNA-bind

?
pfam04926: PAP_RNA-bind (This model is not part of the current CDD release)
Poly(A) polymerase predicted RNA binding domain
Based on its similarity structurally to the RNA recognition motif this domain is thought to be RNA binding.
Statistics
?
PSSM-Id: 516513
Aligned: 98 rows
Threshold Bit Score: 91.5383
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
7Q74_A       361 DFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVT--------RLELVDAIALAHPFNKGF--DKVYNCSSEEEAQQ 430 Schizosaccharom...
Q9N6D7       374 SFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIG--------NLERNPHIALAHVNPKCF--EFKKGQSANNSQNN 443 fruit fly
XP_004077012 366 SFFQKYKHYIVLTASASTEENHLEWVGLVESKIRVLVG--------NLERNEYITLAHVNPQSF--PGSKENRSEND--- 432
XP_032524426 377 NFFSRYKHFIVLLASSANTLDQLPWCGLVESKIRHLIT--------TLERNQHITIAHVNPECY--NSVPLNTNNGHPLA 446
6_pfamImport   1 DFFTRHKTYFMIAMACDNSKEFGRFMGFAETRVRMFAQ--------KLESIENIEYAYTLPKNY--HLEGVTQKEVPLLK 70 
Q4DA83       371 KFFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFLWAgtaesrgyALENIRHVRI-RLNPRRY--EAPEEVETRARLLK 447 Trypanosoma cruzi
XP_001563421 374 PFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRILWAgnassrghTLEDYRQLRL-HLNPRRF--EDPEEVQLRTRLAS 450
XP_020427151 376 DFFSRYQFYLQIDCSAQNEEEHRKWEGWIESKLRKLIS--------FLEQTPKMKFAIPFPKSF--ENKPTPAATTTAAN 445
XP_067745818 360 DFFAVHQHYLAVEVYTEKQDEEQAWCGFCESRMRKLVE--------SLAYNPALCRLRAFTKKY--PLNFVTGGEAPANE 429
4LT6_A       371 nFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVG--------NLERNEFITLAHVNPQSFpgNKEHHKDNN----- 437 human
7Q74_A       431 -VASGVTLEVAYEStdheklandtvneekadnTE-SKADGSENGEKQI----------------FPVYTTTCYIGLELEK 492 Schizosaccharom...
Q9N6D7       444 sGNEDDLKQSQGNQ------------------SAvT----------------------------SAPFCSMWFIGLEFER 477 fruit fly
XP_004077012 433 -------------------------------------------------------------------FVCMWFIGIIFKK 445
XP_032524426 447 lPPGTPVQTEEHGA------------------AEv-KNDKG-----EI----------------VANVCSMWFIGLVFDK 486
6_pfamImport  71 dLQCGD----------------------------------------------------------EEYSFSVLFIGINFSS 92 
Q4DA83       448 kTSRSSGGGNGSME------------------VSs-HQTSGAVDDSSS----------------PKIFSCHYFIGMSVDP 492 Trypanosoma cruzi
XP_001563421 451 kASGAAAA-NHTRG------------------SVg-SRTTGQLSDSGStlrgsppmkdstvslgQTWLTANYFIGMTVDT 510
XP_020427151 446 ----------------------------------------GEAVTDAN----------------NSNVCTSFFMGLGFNF 469
XP_067745818 430 ---------------------------------------QSNGGTPAQ----------------PSKFGVCFYVGFDIDR 454
4LT6_A       438 -------------------------------------------------------------------YVSMWFLGIIFRR 450 human
7Q74_A       493 -KKgh--piKRLDISWPTQEFY-ELC-KKWD--K--YDDTLM---NVFIKNTKNTALPDEVF--EPGEERP 549 Schizosaccharomyces pomb...
Q9N6D7       478 -SEn-----LNVDLTESIQNFTeHVM-MHGV--NikMLKEGM---TIDARHVKRKQLSLYLD--SDFLKRE 534 fruit fly
XP_004077012 446 -VEna--esVNIDLTYDIQSFTdTVY-RQAN--NinMLKDGM---KIEATHVKKKQLHQYLP--PELVQRK 505
XP_032524426 487 -TN------VNVDLTYDISSFTkAVH-YQAE--NtnVLREGM---TIEARHVRRKQLHQYL---SPSLLRR 541
6_pfamImport  93 -VKlplnasKKMNLKKPVQELK-----SSLE--G--YEQEEEcelRYEAIPLKQKALAPILN--LFIEKES 151
Q4DA83       493 -KAt----sGKIYLAPSIRAFH-GIV-RQLR--Q--YKEGITrlpVITVEDIS--KIPAFVK--SAAGFKE 548 Trypanosoma cruzi
XP_001563421 511 -KVs----sAKIDLAPAIRTFH-AVV-RELR--Q--YREGVTrlpVITVVDMT--RIPTFVK--EAAGYVE 566
XP_020427151 470 -SNapg-adKSVDITKAVIDFT-HLI-KDWA--G---KGPTM---EMKVHYIKRRQLPAFVKaeAPPEEKP 528
XP_067745818 455 -RQlr---sREVSIDSSVEYFKnNDL-YRWN--K---RTATM---DVRVTAVVWKSLPESVF--EEMGGRA 510
4LT6_A       451 vENae---sVNIDLTYDIQSFT-DTVyRQANniN--MLKEGM---KIEATHVKKKQLHHYLP--AEILQKK 510 human
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap