Conserved Protein Domain Family
Yip1

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pfam04893: Yip1 
Yip1 domain
The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterized by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases.
Statistics
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PSSM-Id: 398520
Aligned: 217 rows
Threshold Bit Score: 29.7119
Threshold Setting Gi: 158510179
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012659681   13 SGLLDRSRAGFRWLKPD--KQALTVGVVVFVtLAttLGIVALGAAFDATIDREVTVdnpdyppestcetfgedgdsvfve 90  Halorubrum lac...
jgi:Caur_3861 474 FRFISKPADSFSYIKTGerGSLGFALGIY---LW--VIVVYVLSLYLMGFPFNAYA------------------------ 524 Chloroflexus a...
jgi:Fnod_1595 341 KNILKHPLDTFYYIQKKrhGSVLSASIIY---LL--FLIVVLFDYFGRSFIFNLNT------------------------ 391 Fervidobacteri...
jgi:Fnod_0291 470 KNILRHPLDTFYYLQKKkhGSVLSASIIY---LM--FLLVILVDYFGRSFIFNLNT------------------------ 520 Fervidobacteri...
Q3EV92         16 FSIWIKPRDTMKEIFIS--KPKNVFLLIL-------LGSFVQTLDRASSKNVGDSI------------------------ 62  Bacillus thuri...
EAR10656       13 FSIWTQPRATIRQII----RTNPKQSVIL-------LAALGGFAEALDRASYKDAG------------------------ 57  Reinekea bland...
Q2SI34         30 FSMWLQPRATIQQIIDD--DPVHLVIGLTCMaSV--LMRIKEASLYKMAEYMGLMS------------------------ 81  Hahella chejue...
Q7UH00         35 KSIWLSPRRTVRQIIST--DPTLHVVLLACFsGI--GETLDRASMRDLGDRLPLPA------------------------ 86  Pirellula sp.
EAZ83522       33 ISVWLHPKQTARYMINE--KSIGFAILIMSIgYI--GSIMSGLTDSEFFTDLSPWL------------------------ 84  Bacillus sp. B...
Q5WAD2         31 FKVWIRPRQVVADELKTarEKKQTWNYLLIA-YV--SAVLSTFTNFSSGVVPTFAY------------------------ 83  Bacillus claus...
WP_012659681   91 qcdrperiDVDVGEELRSASGEYvgyaLIgvpIWWAIFALALHGGaRLAgGSGSLGd----S-FAIAA--WA-IaaeVAR 162 Halorubrum lac...
jgi:Caur_3861 525 --------YPSQIRVENEIIVPI---------VLLGLWNVANYLVsTISdGEGRVRd----V-VIGTA--YS-L---FPY 576 Chloroflexus a...
jgi:Fnod_1595 392 ----------NERSVGFVILTAA---------APVGLWVISNWLVsSINdGKGTLRd----I-YIFTA--YT-F---APY 441 Fervidobacteri...
jgi:Fnod_0291 521 ----------SDRNVGFVLLTSS---------SILFLWIISNWLVsSINdGKGTLRd----I-YVFTA--YS-F---APY 570 Fervidobacteri...
Q3EV92         63 --------SSPVSIISMVIFGTF----VAfliYYFLLPALFNWVA-KKLgGQGTFEk----TrYSVA---YS-Y---IPY 118 Bacillus thuri...
EAR10656       58 ----------DDFSVVMIVLMAMslgaLGgilAMYVYGWLLSWTG-NWInGQGHREe----I-RAAIA--WA-N---VPV 115 Reinekea bland...
Q2SI34         82 ------------LLGVCIVVGCV----LGv-iWLYIGAPFIQWVG-KWFgGRGSQDe----I-RAAIA--WS-C---IPA 132 Hahella chejue...
Q7UH00         87 -------------IIAVAVILGP----IGgliGVWIGAWLVAITG-KWMgGKGTSEt----V-RTALT--WA-S---IPS 137 Pirellula sp.
EAZ83522       85 -------------LALLCIIFAP----IAgiiGTAISALITWLFG-KLFkGTGTYSdlfkgLsLTAVP--FIvL---IPF 141 Bacillus sp. B...
Q5WAD2         84 --------VIVFALLTSIVVAPI---------SLYVLSWLYKWVG-SWLgGKGTALd------LRVATvhTS-M---IPL 135 Bacillus claus...
WP_012659681  163 LVaglGAIWYVLAtttvegtt-------mesiateIVAAis----tMQGPLlvasavVISVQWVVVVGGLEAYHDLDRG- 230 Halorubrum lac...
jgi:Caur_3861 577 ALfmpLVIALSNVltl----------------neaFLVSfs----qQLIWG--------WTGLMLFIMVREIHNYTLSEt 628 Chloroflexus a...
jgi:Fnod_1595 442 ILfqpLVILSTYIlty----------------netFLIDfa----sLIIIS--------WVGVLLFTGVKEIHDYNIRNt 493 Fervidobacteri...
jgi:Fnod_0291 571 ILfqpLVILSTYVlty----------------nekFLIDfa----sMFLIS--------WSAVMLFTGVKETHDYDIKNt 622 Fervidobacteri...
Q3EV92        119 VYsliLVWVPSFFlfgienftsetpemdssitltiLFLIf-----aIIDIVi-----GIWTIIISLKCLGEAHQFSAWK- 187 Bacillus thuri...
EAR10656      116 IWallLWIPQYALigremfmaeaysltestttfvlFFGLa------VIEVIl-----GIWAFIIFLKCLGEVQGFSAWK- 183 Reinekea bland...
Q2SI34        133 LWgslLIMLEMMLygremfl---------gaeardYNLVdl---kiRAAFSvahgiiGIWGAITFTKALAQVQGYSIWK- 199 Hahella chejue...
Q7UH00        138 IVasiLWIPQLLLlreelftsetprlesnpglivpVLALs------LVEIVl-----AVWSFVLMCNTIAEVQSFGSAWr 206 Pirellula sp.
EAZ83522      142 YLiw--lFTSPESlldpnfm--------gslpwifWPAI-------LASIVv-----TIWSFVISVGVVAEAHQISNWMa 199 Bacillus sp. B...
Q5WAD2        136 IIhglISIPFILVigetyywfdlesillgieialsPLQLwaqnilgLISLTa-----GIWTFVLLMHGIGEAHQFSAWK- 209 Bacillus claus...
WP_012659681  231 IAGTVagv--lavFGLLLAAV 249 Halorubrum lacusprofundi
jgi:Caur_3861 629 TTNILrtlf-tmvMLSLTAYI 648 Chloroflexus aurantiacus J-10-fl
jgi:Fnod_1595 494 IKSILltlg-wifVMILIYSI 513 Fervidobacterium nodosum Rt17-B1
jgi:Fnod_0291 623 VKSILftlg-wvfVIILVYSI 642 Fervidobacterium nodosum Rt17-B1
Q3EV92        188 ALLTIiis--fmiIILPLVII 206 Bacillus thuringiensis serovar israelensis ATCC 35646
EAR10656      184 ALWNCiipllvvgLPFVLIIG 204 Reinekea blandensis MED297
Q2SI34        200 AMGNMtiv--liaGFIPVIAV 218 Hahella chejuensis KCTC 2396
Q7UH00        207 GLFNLila--gaiVLVPIMAL 225 Pirellula sp.
EAZ83522      200 FFTIFipgi-ilfILFFVLFF 219 Bacillus sp. B14905
Q5WAD2        210 SVLVVlil--gamLVVIAVVV 228 Bacillus clausii KSM-K16
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