Conserved Protein Domain Family
Yip1

?
pfam04893: Yip1 (This model is not part of the current CDD release)
Yip1 domain
The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases.
Statistics
?
PSSM-Id: 516493
Aligned: 208 rows
Threshold Bit Score: 30.0971
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_012659681  13 SGLL-DRS----RAGF--RWLKPD--KQALTVGVVVFVtLAttLGIVALGAAFDATIDREVTVdnpdyppestcetfged 83  Halorubrum lacu...
XP_001709377  70 LQILwIFK----SSTA--DHAVYE--TYDFIGPTFW---LT--LYSLFLVIIATKNGDNTGSY----------------- 119
Q6BHA2        99 LAVL--NP----MNRNitSDIMA---DSDLAGPIIF-------VLLFGTLLLLAGKVQFGYIY----------------- 145 Debaryomyces ha...
Q9VK46       114 LAVL--NPl---RGTD--QQILQ---DTDMAGPLVF-------CLTLGGFLLLSGKVTFSYIY----------------- 159 fruit fly
XP_002637203 109 IAVL--NP------TG--SATVEViaDQDLAGPLVFCL-LF--GAALL----LHGKLSFGFIY----------------- 154
Q6CA93        82 LTVL--NP----FRAI--SKHIMD--DSDLAGPILF-------CLLFGTFLLLSGKVHFGYIY----------------- 127 Yarrowia lipoly...
Q6FQ69        86 MYVL--RPtmssAMLS--HEILN---DSDLAGPVIF---FM--LFGLF-------------------------------- 121 [Candida] glabrata
XP_001708516  97 LSILpFVP------VS--DEVAQ---SGDMIIGICV---LI--VFTFVNLLTKSTGTHLGFLF----------------- 143
XP_001704048 103 WQSLlIFK----GDFL--NEAING--PVDLWYPIWVTItLV--FALFLGMTIDIVFNINGNGN----------------- 155
NP_001258661  54 LTVL--HP----LKVA--DGSIMN--ETDLAGPMVF-------CLAFGATLLLAGKIQFGYVY----------------- 99  human
WP_012659681  84 gdsvfveqcdrperiDVDVGEELRSASGEYvgyaLIGVPIWWAIFAL-ALHGGa-RLAGGS-------GS--LGDS-FAI 151 Halorubrum lacu...
XP_001709377 120 ----------------------------------FGIAFAIYFCVGY-LVAFNt-NIVGGR-------VH--IPGT-FCF 153
Q6BHA2       146 ---------------------------------------GVGLFGIIsLHYLF--KLMSDD-------VTidLIRS-ASV 176 Debaryomyces ha...
Q9VK46       160 ---------------------------------------GIGVMGCI-FFYCLlsLMV-SR-------SQvtFG-AvASV 190 fruit fly
XP_002637203 155 -------------------------GVGGL---------GCVGIYAL-MNLMA-----TDE-------KNisFT-CtASV 186
Q6CA93       128 ---------------------------------------GVALVGSVsLHWIL--KLMASD-------VSidFTRT-ASV 158 Yarrowia lipoly...
Q6FQ69       122 ----------------------LLMAGKVH----FGYIYGVALFGTI-SLHTLs-KQMATSssqqqqpSSlhFFNT-ASI 172 [Candida] glabrata
XP_001708516 144 -------------------------GVYIY---------GSLLLTFL-LSMLQq-TAV----------HLdlYT-V-MSA 175
XP_001704048 156 ---------------VSLQGSLPFITLAGL----IA---AYQGLVPL-IFWAVc-KCI-GF-------TElrYT-ViSCL 202
NP_001258661 100 ----------------------GISAIGCL---------GMFCLLNL-MSMTG---------------VS--FG-CvASV 129 human
WP_012659681 152 AA--WA-IaaeVARLV-AGLgaIWYVLAtttvegttmesiateIVAAi--sTMQGPLlvasavviSVQWVVVVGGLEAYH 225 Halorubrum lacu...
XP_001709377 154 LG--YC-L---MPLAA-YTFvaMMMALLagn---------lanWIRSli-vGLTAILat-----tWSSLAAYAFFKNL-- 209
Q6BHA2       177 IG--YC-L---LPLVI-VSVi-GVFVSLdnl----------lgYIFS-----AFAVF--------WCTYSASGFFVAVLK 225 Debaryomyces ha...
Q9VK46       191 LG--YC-L---LPMVVlSGIn-ILITIQgt-----------lgLIVS-----GISIF--------WCAISASKLFATAFS 239 fruit fly
XP_002637203 187 LG--YC-L---LPMAL-LSIvtAVLSFKgi-----------vgYLIS-----SLAVL--------WCSSASSKLFVIALS 235
Q6CA93       159 LG--YC-L---LPLVViSGL--GVVMKLd-------------gTLGA-----ILSLVsv-----tWCTWSSSAIFVSVLR 207 Yarrowia lipoly...
Q6FQ69       173 LG--YC-F---LPLCF-LSFi-GVFHSLd-------------nRIGH-----LTGALfv-----iWSTWSSSGFLNNLLQ 221 [Candida] glabrata
XP_001708516 176 LS--YG-L---LPLLI-PMIicSFLRQE---------------ALEHaqkvVVIGYLga-----aVASSLISTKLLNA-A 227
XP_001704048 203 YSysYTlL---VPLCVv----lGLFRLAdgekgta-tenlgsiIAGG-----VFGIVg------aWAMLFFVVQLIKYLK 263
NP_001258661 130 LG--YC-L---LPMIL-LSS-----------------------FAVIfslqGMVGIIltag-iigWCSFSASKIFISALA 178 human
WP_012659681 226 DLDRG-IAGTVAGVLAVFGLLLAAV 249 Halorubrum lacusprofundi
XP_001709377 210 --ALQgKAFMTIYPVILFFVVFGVL 232
Q6BHA2       226 LHNVRpLIAYPLAM---FYTVFALM 247 Debaryomyces hansenii
Q9VK46       240 MDHQQlLIAYPCAV---LYGGFALI 261 fruit fly
XP_002637203 236 MDHQR------------LLMSLKIE 248
Q6CA93       208 LSDMRaLVAYPLAL---FYGVFSIM 229 Yarrowia lipolytica
Q6FQ69       222 LQNAR---TLIAYPLLIFYSVFALM 243 [Candida] glabrata
XP_001708516 228 VRLENvKTLIAIPAFLITMCYVLVQ 252
XP_001704048 264 KLDVGkKNLMI------MGLLFGIV 282
NP_001258661 179 MEGQQlLVAYPCAL---LYGVFALI 200 human
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap