Conserved Protein Domain Family
DUF642

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pfam04862: DUF642 
Protein of unknown function (DUF642)
This family represents a duplicated conserved region found in a number of uncharacterized plant proteins, potentially in the stem. There is a conserved CGP sequence motif.
Statistics
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PSSM-Id: 398500
Aligned: 50 rows
Threshold Bit Score: 114.272
Threshold Setting Gi: 501225316
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_025882433     38 GVLVNGNFAMS---PR--K--M-NATVIV-GRDSLPGWALR-GRVEYVSGGpqpgGMYFAAAPGAHALRL----G--ARA 101  Japanese rice
ADJ67202         23 DLLQNSDFETP---PLniPknSsIPFQLLnQNTTIPGWSFE-GTVLYVTA-----TDTIALPGNGHAIQL----G--QDG 87   Jatropha cu...
XP_002873652     21 DFLENPDFESP---PLnlTtnSnASSVSLdQNSTLPGWTFQ-GTVLYVE-----------LPDTGHAVQL----S--EDG 79   Arabidopsis...
EHJ12521         28 NLINNGSFEIG---QD--Pg--gNFTALSpGATNITDWTVI-GPVDYV-------GGVWQASDGSRSVDL----NelSAG 88   Crocosphaer...
BAI81483        149 NLIKNGSFELG---PQ--Hv--gSWLTLSkGSNKINNWTITkGSIDLI-------ENYWQSSHGKRSIDM----CgsTCG 210  Deferribact...
Q47FY0           35 LPLINGDFENT---SL--AgnP-AYYTLAaGSTAITGWTVGgQGIDYI-------KNYWQDASGNFSLDL----SgtGSG 97   Dechloromon...
WP_012268334     34 NLIINGSFEEGdydSN--VvdP-NFARLSqGSSALTGWTIGgAGVDWHNSN----DMKFPI-EGDLIIDLnldgG--SSG 103  Microcystis...
EFL25792         32 SHFDGGSFETP-------RvaAnTFVNVGtGGSIGP-WKVTgGNVDHIGDG------FWQAAEGDQSVDL----NgeNAG 93   Streptomyce...
WP_014179953     40 SRFDDGSFEYP---TA--Pa--nAFSTLSsGQSIGP-WKVTgGGVDLIGAG------FWQAAEGDQSVDL----NavQPG 101  Streptomyces
jgi:Strvi_8224   31 SRFDDGSFETP---AV--GanT-FGTVAA-GGTIGP-WQVTsGNVDHIGDG------FWQAAEGGQSVDL----NgtGAG 92   Streptomyce...
XP_025882433    102 SAAQAVA-VRPGAAYALTFAAT----RACAR-DgereEALRVAVSP-SFsapGDVPVRTL---YGAGAADAWAWGFRA-- 169  Japanese rice
ADJ67202         88 KINQTFSpSADYIHYLLTFSLAtsggSNCSS-N----ASVGVSASD-RP---SVFFFKQN---YGKEKWESYGVYLGSwe 155  Jatropha cu...
XP_002873652     80 KINQTFIaKGDDLNYILTFALIha-gQNCSS-S----AGLSVSGPD-SN---AVFSYRQN---YSKVSWQSYSHNLGSwg 146  Arabidopsis...
EHJ12521         89 EIQQTFN-TIVGENYTVTFDLAgnpqGGPTL------KSMTVLAAG-DS---ADFTFDISgksTSNMGWETKTWMFTA-- 155  Crocosphaer...
BAI81483        211 AISQNIN-TAPGTTYQLTFDLAgnpdNQGIKyL----KVIAGSVS-------KTFQFNTTgknKRNMGWIKKSLTFTA-- 276  Deferribact...
Q47FY0           98 SISQAFD-TLAGHTYQVTFAMAgnpdDMTGP-El--vKQLRAVAA--NFndvFQFHHDTSsnsRTNMGWIEQSFSFTA-- 169  Dechloromon...
WP_012268334    104 TLSQTFS-TIIGQFYTLSFSLAgpdlSATNP-SfpnpRQVSVQVAA------VNQIFSTSasdHLDLQWQLHELSFQA-- 173  Microcystis...
EFL25792         94 TVSQNFT-TVPGKRYTVTYSLAgnpgVGGPA-L----KTGKVLVDGqDF---QNFSFDTTgktMANMGYVTREVSFVA-- 162  Streptomyce...
WP_014179953    102 AVAQTFS-TVPGRKYTVTYSLAsnpgGPAVK-T----GKVLIDGQ--DF---QDFSFNSTgksHANMGYVTREVTFVA-- 168  Streptomyces
jgi:Strvi_8224   93 SVAQTFT-TVPGKRYTVTYSLAgnpaGGPTMkT----GSVLVDGQ--NF---RNFTFDITgksFGNMGYVTQEVTFVA-- 160  Streptomyce...
XP_025882433    170 AERNAQVEF--SNPAAADDHdgddglNCGPLLAAVA-FK 205  Japanese rice
ADJ67202        156 LEEKINLVI--ESEATESDGn----eTCWPLIDKLL-LK 187  Jatropha curcas
XP_002873652    147 NGQPINLVL--ESQAIDSDSdt--nsTCWPIIDTLL-IK 180  Arabidopsis lyrata subsp. lyrata
EHJ12521        156 TGSTTTLSFisNNDGNA-----------GPALDNVS-VS 182  Crocosphaera watsonii WH 0003
BAI81483        277 TSNITNISF----IALDNNPs-----AWGPAIDNVKiVR 306  Deferribacter desulfuricans SSM1
Q47FY0          170 LANQTTLSF--ESMESS---------AYGPALDNVR-VA 196  Dechloromonas aromatica RCB
WP_012268334    174 TGNQTTLTF----SSLDNSG------FWGPALDNVTvVS 202  Microcystis aeruginosa
EFL25792        163 TGATTTLSF--ASTMSG---------AWGPVIDDVT-VR 189  Streptomyces himastatinicus ATCC 53653
WP_014179953    169 GGNTTTLGF--ASTVGG---------AYGPVIDDVR-VE 195  Streptomyces
jgi:Strvi_8224  161 RGTSTTLAF--ASTNNS---------AYGPVIDDVM-VR 187  Streptomyces violaceusniger Tu 4113
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