2NUP,3EH2,3EH1,5KYY,5VNG


Conserved Protein Domain Family
Sec23_helical

?
pfam04815: Sec23_helical (This model is not part of the current CDD release)
Sec23/Sec24 helical domain
COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is composed of five alpha helices.
Statistics
?
PSSM-Id: 516449
Aligned: 312 rows
Threshold Bit Score: 49.4347
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2NUP_A         522 DQEAAAILMARLAIYRAEt--EEGPDVLRWLDRQLIRLCQKFGEYHKd---DPSSFRFSETFSLYPQFMFHLRRSSFLQV 596  human
XP_015789792   709 CCDTIMNLFLRSGVSQLKngtKTPQQIKEHLISRCVAILSSYRKHCAspgsPLGQLILPEALKLLPIYTIGAFKCDAING 788 
XP_001605636   970 DLDAIINYLSKQCVFKLId--STPKAIKDSLNSRCAAILASYRKHCAsp-sSAGQLILPECMKLLPLYTNGLLKSDATTG 1046
XP_001601102   950 DLDAIINFLLKQNVSKLVe--YSPKAIKDGLNSRCAAILAAYRKHCAtp-sSAGQLILPECMKLLPLYINSLLKSDALTG 1026
EFX64474       532 DLDTVMNLLMKQSVTKLTe--SSPKQIKDGLINRSAQILACYRKNCAsp-sSPGQLILPECMKLLPLYINCLLNCDALSG 608 
35_pfamImport    1 ELDTIINFLSKQSVYKLLd--STPKAVKESLIIRSAQMLACYRKNCAsp-tSAGQLILPECMKLLPLYVNCLLKCDAISG 77  
4_pfamImport     1 DLDTIMNFFGKQVMYKILe--SSGRQVKEAITNKTAQILATYRKHCAsp-sSAGQLILPECMKLMPLYVNCLIKSDAMSG 77  
XP_002432108   907 DLDTLVNYLSKQGIFKLLe--SSPKQVKNDIMNRCANILACYRKNCAnp-sSTGQLILPECMKLLPLYVNTLLKSDAFSG 983 
XP_971886      835 DCDTIINYVSKQATYKLYe--HNPKAVKDSIVTRAAQILASYRKNCAsp-sSAGQLILPECMKLLPLYVNCLLKSDALSG 911 
ETN61898       861 DIDSTLLFFAKQGLTKLMd--GTPAAVKAAIVQRSVQLLACYRKYCAsa-tSAGQLILPEGMKLLPLYVNCLLKNDAFSG 937 
2NUP_A         597 FnNSP-DESSYYRHHFMRQDLTQSLI 621  human
XP_015789792   789 GaELSpDEKAYAQIVTLGASIDLTQV 814 
XP_001605636  1047 GnGITvDQKSYVMMAVATMPISESVV 1072
XP_001601102  1027 GaGITiDQKSYVMMAVSSMPITETVA 1052
EFX64474       609 GsDMSiDDRTFNMFAVQTMHVGASLA 634 
35_pfamImport   78 GsDMSiDDRWFTMAAVMTMDIPSSLN 103 
4_pfamImport    78 GpDLTvDDRWFNMHLVITADIPTTLG 103 
XP_002432108   984 GsDMTcDDRSFAIHCVMIMDLTVSVC 1009
XP_971886      912 GsDMTiDDRSYVMQEVMIMDIPTSVN 937 
ETN61898       938 GaDMSiDDRSYVIYYVMSMDLPASVH 963 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap