4CPC


Conserved Protein Domain Family
Cor1

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pfam04803: Cor1 (This model is not part of the current CDD release)
Cor1/Xlr/Xmr conserved region
Cor1 is a component of the chromosome core in the meiotic prophase chromosomes. Xlr is a lymphoid cell specific protein. Xlm is abundantly transcribed in testis in a tissue-specific and developmentally regulated manner. The protein is located in the nuclei of spermatocytes, early in the prophase of the first meiotic division, and later becomes concentrated in the XY nuclear subregion where it is in particular associated with the axes of sex chromosomes.
Statistics
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PSSM-Id: 516444
Aligned: 32 rows
Threshold Bit Score: 95.7683
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4CPC_A        20 KALLAKRKRLEMYTKASLKTSNQKIEHVWKTQQDQRQKLNQEYSQQFLTLFQQWDLDMQKAEEQEEKILNMFRQQQKILQ 99  human
Q99L59        70 KVLQENREKFSRIMTSSFSAMEVKIKDVLKTQCEQRQKLCQDYSLQFTNLSRKLTSDAYKLKKQAETLSNMFMEQQKFIH 149 house mouse
XP_007605801  65 KPLHGRRKRYVLSVSNTIYNVEQRINHFLKLQHERRQEMYKEYSHQFLTLVVMWNIDVDQVKKHAENLSNILEEQQKLFQ 144
XP_003387517  77 KTIQNKKRKIETFTKESLEYSKRKMKEVNTKQSADRQVVLNSYTKQVDVILGQWEEDLGKMKEGEEKLSLVMKQFQTQSR 156
EDO43143      21 NTLNAKRKRIQSFSQASLKASSRKFDEVWRKQQNERSAQYEEFSKQVLLVLGQWEADLQKTREAEEKLESMYKQQQKLFN 100
8_pfamImport   1 KSVSLKRKKLEAFTKQCC-AAADRFENVFEIQKRDRGALNEEYTKQVSSVIKQWEADIDKAKENEEKLTNLLTQQMKLIT 79 
XP_002125203  77 KSISSKRRKLEAFTKQCC-AAREKLDSVLENQKKDRSTLNEEYKKQISSVINQWETDIDKAKENEEKLNNLLTQQMKLIT 155
XP_011245908  60 KTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQ 139 house mouse
XP_006229590  60 KSFNERKRRYVLNVSHTVQNIEWKIDHFLKLQHEQRQKLYQDYSHQFLTLAVMWNIDVEQVKKHAEKLSNILDEQQKLFQ 139 Norway rat
XP_028934505 292 KDLLDLMKKVELYVKASLPVSGLEIEQGGKTQQELRDEIKRYYSQEFLKIFQQCNETVQIFEELYNSVTEPFYQQNGF-- 369 platypus
4CPC_A       100 QSRIVQSQRLKTIKQLYEQFIKSMEELEKNHDNLLTGAQNEFKKEMAMLQKK 151 human
Q99L59       150 ETLTLQKNRMEEFKSLCEKYLEKLEVLRDSRGNSIAE---ELRRLIATLEIK 198 house mouse
XP_007605801 145 QFQVIHKEKIEEFKELCNRHLKSLQAIKSCRRKAIIE---EARKQMDVLERK 193
XP_003387517 157 QQRLAMLQKYKTMKQLKDEFAKSIDQLQETHDKQLSSIHDEMKEEMAQLRKK 208
EDO43143     101 QQRIVQTQRLKRVQQLHEDYGKSLKELRKTHEDQQSSVQEQLRKEISGLQKK 152
8_pfamImport  80 QVRVVQTQRFKSIKQLHEQYMKSVGTVDETHSEQNRDVNKEIEKELTGLQKK 131
XP_002125203 156 QVRVVQTQRFKSIKQLHDQYIKSVGTVNETHSQQHKDVNKEIDKELSNLQKK 207
XP_011245908 140 QFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIE---EARKLMDYLEKR 188 house mouse
XP_006229590 140 QFQGIHMQKIEEFKELCDRHLKNLQAIKRCRRKAIVE---EARKQMGCLERK 188 Norway rat
XP_028934505 370 QPSSLDEEILEAFRQRYDQFTKAIEEMKRENEVILMNAQNDLEKILELHSKP 421 platypus
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