2JYA,6GCS,2LJU


Conserved Protein Domain Family
ETC_C1_NDUFA4

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pfam04800: ETC_C1_NDUFA4 
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ETC complex I subunit conserved region
Family of pankaryotic NADH-ubiquinone oxidoreductase subunits (EC:1.6.5.3) (EC:1.6.99.3) from complex I of the electron transport chain initially identified in Neurospora crassa as a 21 kDa protein.
Statistics
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PSSM-Id: 398460
Aligned: 144 rows
Threshold Bit Score: 114.13
Threshold Setting Gi: 308754336
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JYA_A         5 SAKIYRPAKTAMQSGTAKTN------VWVLEF-DAEVp--RKIDPIMGYTSSSDMKQQVKLTFETQEQAEAYAQRKGIEY 75  Agrobacterium f...
ACI98502       2 KVRIYQPSKTTMQSGRAKTS------GWLLEY-EIETp--RRAEPLMGWISSGDTLNQVRLRFDSKEAAIAFAEKKGWAC 72  Rhodospirillum ...
WP_014247573   2 NVRIYQPSKTAMQSGRAKTH------RWMLDY-EIETp--RRPEPLMGWTSSGDTLNQVRLSFETKEEAIAFAEREGWNY 72  Azospirillum
EGG13641      75 TVLIYKPSRITMQSGTLRTR------KWRLEL-PVNN---KWHDGLMGWWASAGTLNQINLTFPAEESAIAYCKENGLNY 144 Cavenderia fasc...
EFA77084      88 TVLIYRPSRITMQSGTLRTR------KWRLEL-PIVD---KWHDGLMGWWASAGTLGQVQLAFDSEAGAISYCKENGLNY 157 Heterostelium a...
Q8T1V6        85 SVNIYRPSRNTMQTGTLRTK------KWVIEL-PFNP---KWNDRLMGWWASKDTLNQLNLRFNSETDAVAYCKEIGLNY 154 Dictyostelium d...
XP_003288024  61 TVIIYKPSRNTMQTGTLATR------KWVIGL-PFAD---KWNDRLMGWCSSKDSLNQLNLKFSSEADAVAYCKEIGLDY 130 Dictyostelium p...
EGR34726      83 TARIYVHDINH----MHDTPelsegyQWCMQF-QRQA---QYKTPNMGWVHNGDTFSKRNNYFRTLEDAIQYCKQMGYGY 154 Ichthyophthiriu...
6_pfamImport   1 ---IRKRPKHVMQQGTSNTH------SWILKF-NRSK---TWENPLIGWESSDDCLSPSELTFNDLDAAVQHCKKFGWQY 67 
EFC43704      51 TVRIYKPTKVVTQQGISNTL------KWKLEWkKQSVhgeFWHDPLMGWNASNDPLLTTYVFFNSKEDAIDYCKRHGYIY 124 Naegleria gruberi
2JYA_A        76 -RVIL-PKe----ATRKVV---SYTDNFRFNRTQ 100 Agrobacterium fabrum str. C58
ACI98502      73 -DVAEsHT-----RRVTPK---SYADNFRSDRpr 97  Rhodospirillum centenum SW
WP_014247573  73 -TVQEaPV-----RRVRPR---NYADNFRTDRpr 97  Azospirillum
EGG13641     145 eILDE-DH-----TTMKKK---RYGYRFIYQGdl 169 Cavenderia fasciculata
EFA77084     158 eVLQE-DV-----VTTKKK---RYGYRFLYKGel 182 Heterostelium album PN500
Q8T1V6       155 nIVEE-DV-----TLRKKK---KYGHRFRYRgdl 179 Dictyostelium discoideum
XP_003288024 131 tIVGG-EE-----QIKKKK---KYGYRFRYRgdl 155 Dictyostelium purpureum
EGR34726     155 -EVDY-Pk----fRYHSKK---SYADNMKWPGhd 179 Ichthyophthirius multifiliis
6_pfamImport  68 -QFEEeP------QIHKPIkqqSYADNFSYKKRC 94 
EFC43704     125 -EIED-PedsknlEDLGGK---SYSDKFKYRKEE 153 Naegleria gruberi
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