6HTS


Conserved Protein Domain Family
PAPA-1

?
pfam04795: PAPA-1 
PAPA-1-like conserved region
Family of proteins with a conserved region found in PAPA-1, a PAP-1 binding protein.
Statistics
?
PSSM-Id: 398458
Aligned: 83 rows
Threshold Bit Score: 49.1126
Threshold Setting Gi: 1511409560
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6HTS_R       211 EMLLKREERARKRRLQAARRAEEHKNQTIERLTKTAATS----GR------------GGRGGARGERRGGraaaPAP--- 271
O22909       345 EQQLKKAEAAQRRKVQIEKAARESEEGAIKKILGQDSSRkkrgDKikkrlddlaqekAAQEERASTC------------- 411 thale cress
XP_018679213 442 EIQAKRAEAAQRRKMQVEKQARESEAEAIRKILGQGSDKkkeeKKqkele---ekakLAKSQPLSPS------------- 505 wild Malaysian ...
Q0IMM4       236 EMLAKKAEAAQRRKMQVEKATKESEAEAIRKILGLDSEKkkeeRKqkere---dkerAARAQTIPEN------------- 299 Japanese rice
XP_015628069 376 EAQAKKAEAAQRRKLQVEKAEREQQAEAVRKILGIDIEKkkeeRKqkerd---ekekQEKTEEYRRN------------- 439 Japanese rice
XP_002463664 386 EIQAKKAEAAQRRKMQVEKAEKEQQAEAMRKILGIDSEKkkeeKKlkere---erekQARLEENRKN------------- 449 sorghum
EFH68221     356 DQQLKKAEAAQRRKLQVEKAARESEAEAIRKILGQDSSRkkkeDKikkrqedkakekAADSIARRSD------------- 422 Arabidopsis lyr...
A0DGJ8       147 eemiSKSQKELQRKEKLQKQQEEQKQMTVDKILNEIGRKqk----------------qrQQQEDKKTEDThkyrSLPqnd 210 Paramecium tetr...
Q22GD9       274 EDQMKKIEKEEKRRAQMQKQIEDLKRQTVDKILNEAGTKqk--------------krKEKEEIEKDNKINhqyrKLPqgm 339 Tetrahymena the...
XP_009413010 451 EIQAKKAEAAQRRKMQVEKQARESEAEAIRKILGQDSDKkkeeKKqkelee-karfakSQALGP-S-------------- 514 wild Malaysian ...
6HTS_R       272 -MVRYCSGAQGSTLSFP 287
O22909       412 -CIRTIMGPNGTTVSFP 427 thale cress
XP_018679213 506 -TIRWVRGPFGTVVTFA 521 wild Malaysian banana
Q0IMM4       300 -TIRWVMGPKGTVVSFP 315 Japanese rice
XP_015628069 440 -CIQCVMGPEGTVVTFP 455 Japanese rice
XP_002463664 450 -CVRTVMSPTGTVITFP 465 sorghum
EFH68221     423 -TVKWVMGPSGTIVTFP 438 Arabidopsis lyrata subsp. lyrata
A0DGJ8       211 iIIKYKSNSEGTFIIMP 227 Paramecium tetraurelia
Q22GD9       340 pRIRILNNSQGSIVSIT 356 Tetrahymena thermophila SB210
XP_009413010 515 -TIRCVIGPGGTVVTFA 530 wild Malaysian banana
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap