7JRJ


Conserved Protein Domain Family
Radial_spoke

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pfam04712: Radial_spoke (This model is not part of the current CDD release)
Radial spokehead-like protein
This family includes the radial spoke head proteins RSP4 and RSP6 from Chlamydomonas reinhardtii, and several eukaryotic homologues, including mammalian RSHL1, the protein product of a familial ciliary dyskinesia candidate gene.
Statistics
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PSSM-Id: 516390
Aligned: 33 rows
Threshold Bit Score: 347.399
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7JRJ_C        11 ALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAV---DLLET-SLLVKKS----------TFdpKESSPLV-PIPVAP 75  Chlamydomonas r...
Q4DHQ3        46 AMTGLTE-NEIRESPLWQHMKKVLLQVVQQQPSSAL---DAIIPsSFVVQTG----------SAvpPHATTIYaDHRPRV 111 Trypanosoma cruzi
XP_001466588 113 AMAGIDE-HQIRQSALWGHMTQALAQVIRERPADAM---DALGAaSNQLLSG----------SAvpPMKGNMYaDPRPTA 178
XP_001700728  10 ALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAV---DLLET-SLLVKKS----------TFdpKESSPLV-PIPVAP 74 
XP_002675993  13 AKAYLQT-TNENGKSIYDMLIDIVSYLQDHKDAKEInlkKLVEQlSEDGFKYgersgfdelwKLskPNPE----SCNKAR 87 
XP_002005830  93 AKSILQQYSTLSGDNLFDHLSDIVKRVVDERPPNVI---DFFEEfSRNVREQ----------KFhvPERFPPN-AVFADC 158
XP_001987084  94 AKSILKQYSTLSGDNLFDHISDIVKRVVDERPPNVI---DFFEEfSRNVREQ----------KFhvPERFPPN-GVFADC 159
XP_002063482  94 AKSIMQQYSTLSGDNLFDHISDIIKRVIDERPPNVI---DFFEEfSRNVREQ----------KFhlPERFPPQ-GVFDES 159
Q4DE57        17 TKAYLMN-ANKDGVSVYDQLTRLMEQLLDENPHDIAadpSRFNEiFTLLQQS----------SFvnGQSTPAC-NEPCSV 84  Trypanosoma cruzi
Q9W1D3        87 AKSILQKYSTLSGDNLFDHLSDIIKRVIDERPPNVI---DFFEEfSRNVREQ----------KFhlPERFPPS-GVFDEV 152 fruit fly
7JRJ_C        76 DATQT-QAAVSIFgDPelpinpatgepvpaDPPNEFE--AE--------------------------N-----------M 115 Chlamydomonas r...
Q4DHQ3       112 TNAVPsDALENLRwASsfgnvlappkprrkPTEEDEEmpQEeaeeneee-----------vllgevsN-----------V 169 Trypanosoma cruzi
XP_001466588 179 RAAAPvDSFTNTRwAAntntalapprpprrPRRADAEdeQEeedasadagadgqpqvdladhpgalsD-----------V 247
XP_001700728  75 DATQTqAA-VSIFgDPelpinpatgepvpaDPPNEFEaeN---------------------------------------M 114
XP_002675993  88 EIVEVlSKQQNVM-KEefskrkkaieelnvKKDGDDDnqDDpveenpdimy-------lysnedgvsN-----------L 148
XP_002005830 159 RMFRPaKRILHSIkLPhnaegsdlggdedfGEEA-YTyaDGelqi-------------------dldDsmrlfvsfnerV 218
XP_001987084 160 RMFRPaKQILHSIkLPhsgenldfegdedlGGEEF----EAelri-------------------nidDsmrmfvtfnerV 216
XP_002063482 160 RMFRIaKTILQSMkLPynietedfgiqedvSAED-KTnvDDdfri-------------------vidDsirhfvtfnerV 219
Q4DE57        85 PPFELaRLadnerl----------fdrpppETLTTIEqpDPyttv-------------------tttRikphtappydsV 135 Trypanosoma cruzi
Q9W1D3       153 RSFRVaKKILQSMkLPyvveged-lmgedlSVEDLRT--NEdmri-------------------vidDsmryfvtfnerV 210 fruit fly
7JRJ_C       116 LGAAAVLDCLGVGLGRELGVNIALAAKRIGEDPKLAvrSVRFFGKFLGLYSDYFVFEVAFKkea-----------akeAA 184 Chlamydomonas r...
Q4DHQ3       170 VGEQAIFNSVGEGLQPEEAFRLVVGMKQLVKTEPLA--TARFWGKILGSGADYYIVETKIDper-----------lpeDE 236 Trypanosoma cruzi
XP_001466588 248 VTEQQYFNMVGLGLPRVDAYRLLVGLRQLIRSEPLS--TVRFWGVVTGSAYDYYVAECQVDedr-----------mqeNA 314
XP_001700728 115 LGAAAVLDCLGVGLGRELGVNIALAAKRIGEDPKLAvrSVRFFGKFLGLYSDYFVFEVAFKkea-----------akeAA 183
XP_002675993 149 IEDFYALELVGVGLPHEEIAKLSVAIQNLKSSKSLR--YLRFVGKILGIESHYYVVESNYYfkekv-------------- 212
XP_002005830 219 EQLQFFWNQCGFTISKDDIFQLAGSINRLQTHPSIM--QCRFWGCINGLKASYYIVEASLTreeissrltmmeeemreKQ 296
XP_001987084 217 EQLQFYWNQCGFSISKDDIFQLASSINRLQTHPSIM--QCRFWGCISGLKASYYIVEASLSreeiasrltmmkeemreKQ 294
XP_002063482 220 QQLQFFWNQCGFSISNDDTFQLACAMNRLQTHPSIM--QCRFWGCINGLKASYYIVEASLTreeiasrlvmmeeemreKQ 297
Q4DE57       136 AQHNLYWAWAGCGVTEEEAFLLDRSITMLAMEKKLR--DVRFFGKIFGTKADYYVVSSQRYvqdgekvykev-------- 205 Trypanosoma cruzi
Q9W1D3       211 QQLQFYWTQCGFSISNDDIFQLASAMNRLQTHPSIM--QCRFWGCINGLKASYYIVEASLTreeiasrlvmmeeemrqKQ 288 fruit fly
7JRJ_C       185 PAAPAPERVEGEAASSs-------------------------------aP---E---VP-VEEPG-KGANKFTYLVC-SS 224 Chlamydomonas r...
Q4DHQ3       237 EDVGMAD-----DEEEegtpidnvad-------------vlysygakkqAd------TE-VEPAG-SGLNEWVYYAA-QT 289 Trypanosoma cruzi
XP_001466588 315 GITGEGDAEDDMEEEEehapvsqiad-------------vlctlaggrlArrwPrpsAP-AEEAG-TGLNAMCYYAS-TS 378
XP_001700728 184 PAAPAPERVEGEAASSsa-------------------------------------peVP-VEEPG-KGANKFTYLVC-SS 223
XP_002675993 213 -------------------------------------------------------pqdkiHESGGkAGLNRFTYWVLrSK 237
XP_002005830 297 LPFKMRKNQEPNPLPShigpeltpgvygwenfspedlekmtpkappvplAeeiEfydIP-PELVG-LGCNRYSYFVV-NN 373
XP_001987084 295 LPFKVRKNQEAKPAPAhigpeltpgtygwelyakdelekmtpkakpvplAeeiEvydIP-PEYIG-NGCNRFSYFVV-NC 371
XP_002063482 298 LPLKMQKNREEKPAPPhigpeltpgiygwdnyspeelvhmkpkaaavplVqemEfydIP-PEYIG-LGCNRFSYFVV-NS 374
Q4DE57       206 --------------------------------------ntmprparrklE-------VPvQPEPGfVGVNRLSFWVT-SH 239 Trypanosoma cruzi
Q9W1D3       289 IPFPMRKDREDKPPPAhigpeltpgiygweefppeelekmkpkaapvplVeemElydIP-PEFIG-KGCNRYSYFVV-NS 365 fruit fly
7JRJ_C       225 LG-GPLTRLPDVTPAQVKASRRIKKLLTGRLTSHVSTYPAFPGNEANYLRALIARISAATVVAPSDLFS---------L- 293 Chlamydomonas r...
Q4DHQ3       290 ADpTSWTRLPDVTPNQVIVARHIRRGFTGDLESSVDTHPHFPGKEMNYLRAQIARISCACRVAPRDMYT----------- 358 Trypanosoma cruzi
XP_001466588 379 ADpTTWTRLPDVSPHHITVARALRCRFTGNLDAPVHGHPRFMGCEKHYLRAQIARITSACRIAPVQTFT----------- 447
XP_001700728 224 LG-GPLTRLPDVTPAQVKASRRIKKLLTGRLTSHVSTYPAFPGNEANYLRALIARISAATVVAPSDLFSln--------- 293
XP_002675993 238 DSlTNFVNLPDVTPQQINAARNISKLFTGNLEKEIISYPPFPGNEANYLRAQIARIVHSTTIAPFDLFE----------- 306
XP_002005830 374 LY-DDWIELPIVTPRQIVVSRQIKKFFTGDLESDIVSYPCFPGKEKHYLRAIIARITASTHIAPQGYYRrmtkkekdlFd 452
XP_001987084 372 LH-NDWIELPIVTPRQIVVSRQIKKFFTGDLEADVVSYPCFPGKEKHYLRAVIGRITAGTYIAPQGYYRrmtkkeknlYd 450
XP_002063482 375 LY-DDWIELPIVTPRQIVVSRQIKKFFTGDLEADVISYPCFPGKEKHYLRAMIARITAGTYIAPQGYYRrmtkrekrlFe 453
Q4DE57       240 PA-AEWKLLPDVTPQQILAGRRIKRLFTGDLNAAVIASPPFEWNEAVYLRVQLSRIASGTYISPMGALE----------- 307 Trypanosoma cruzi
Q9W1D3       366 LF-DDWIELPIVTPRQIVVSRQIKKFLTGDLEADVISYPCFPGKEKHYLRTLIGRITAGTYIAPVGYYRrmtkkeqrmFd 444 fruit fly
7JRJ_C       294 -------NDE-------------------------------TGELERAEDWEPPAG----------REMAAPTAWVHVRP 325 Chlamydomonas r...
Q4DHQ3       359 -------SEGavpeeedeegnvlpp--pesvkayttlppltPQEVPDEEDTEAIEPikswfygyrdDELLQGKYWVHIAP 429 Trypanosoma cruzi
XP_001466588 448 -------TEGavpdaeedeeetsarppptavpayavlppllPQEAPDEEDAEAIAAvqawykgytkGELMQAKGWSHIAP 520
XP_001700728 294 ---------------------------------------deTGELERAEDWEPPAG----------REMAAPTAWVHVRP 324
XP_002675993 307 -------EREvteandeddddsnekkkkneikykevlpppvKTKAFELKDPEGMKs---------------lEHWVHLYP 364
XP_002005830 453 gv--nfdDEEeeqeeednyn-----------egeedtiqdnDVMLLKNERFEIEPL----------ATLATPVAWVHCRP 509
XP_001987084 451 gin-lnqEEEeeeeeeddfn-----------egkeeesqdnDIQLMRNERFEIEPL----------STLATPAAWVHVRS 508
XP_002063482 454 gg---evDEEeeeeeeedfe------------geedtlddnDVMLLKNERYEMEPL----------GSLETPIAWVHVRS 508
Q4DE57       308 -------EPEeevdeeeeaeddegdaakkpreakyrpltqpVKGFASEEDSDVTQW----------AKL---DQWVHSEG 367 Trypanosoma cruzi
Q9W1D3       445 geeeeegEEEeeeeeeeefn-----------egeeeqiednDVMLLKNEKYEAEPL----------GSLATPVAWVHVRS 503 fruit fly
7JRJ_C       326 HLKS-QGRCEVH----------K--------------RELPEDADEDE-F---YN-------ED-------ELEEGPDLL 362 Chlamydomonas r...
Q4DHQ3       430 TLLQ-TGRTV-----------------------------AREQEEEDTgFd--------------------HSEKIHPFL 459 Trypanosoma cruzi
XP_001466588 521 SVLN-CGRVTTAp------------------------VEEEEEPADDEgDdgqGDganaseaSPp-----pAPEMIAPFL 570
XP_001700728 325 HLKS-QGRCEVHk------------------------RELPEDADEDEfYne------------------dELEEGPDLL 361
XP_002675993 365 GILK-SGFITKEpl---------------------pgDQEPADPEDDK-----------------------DPEV--PSF 397
XP_002005830 510 NILN-QGRIVWYdeekarkereKalamylkmrlmeemDEEVEEEEADGee--eGE-------EEemiegfnQPETGPDIL 579
XP_001987084 509 NILN-QGRVVWYdeeladkerkKalamylkmraleemGEELEEEEDAE-EeedGE-------EEdmlegfiHPETGPNIL 579
XP_002063482 509 NILN-QGRVVWFdeekaqkereKalahylkmrlmeemEEEIEEEEAEDee--eGD-------EEgildhfiQPETGPSIL 578
Q4DE57       368 YIYA-NGRQTKVpekqedeeeeE--------------AEELQQQQQQEeEeeeEE-------EE-------EEEEERELF 418 Trypanosoma cruzi
Q9W1D3       504 NILNqQGRVVWYdeekarkereKalalylkmqmlgemEEEVEEEEDEEeGeeeGE-------EEgmiegfnQPELGPSIL 576 fruit fly
7JRJ_C       363 AALEED-----------------------------------AqLPGEQAA--------------------W-----TPIY 382 Chlamydomonas r...
Q4DHQ3       460 CEVSRDdpl-----------------------------tyaShSRSQLPA--------------------W-----SFRK 485 Trypanosoma cruzi
XP_001466588 571 SDISLDapl-----------------------------sypGhSRSHLAP--------------------W-----TFRK 596
XP_001700728 362 AALEED-----------------------------------AqLPGEQAA--------------------W-----TPIY 381
XP_002675993 398 KLLQEDdglkkckeagasp---------kkksedddndddgEnKEAKLSC--------------------WkvsfsNVRK 448
XP_002005830 580 TSCASD-----------------------------------M-SPDCVVP--------------------W-----LVRF 598
XP_001987084 580 SSCAGD-----------------------------------M-SNVCSIP--------------------W-----GVRF 598
XP_002063482 579 SSCGSD-----------------------------------T-KDEVRQP--------------------W-----LVRL 597
Q4DE57       419 TPINLDflyavinipeppkvdeedeeeeeedddpaedaadaEkDFDDMPPkpvtdadvpdddptkvkiaaW-----TVRV 493 Trypanosoma cruzi
Q9W1D3       577 SSCAND-----------------------------------M-NPEVPVS--------------------W-----LARM 595 fruit fly
7JRJ_C       383 SSASEAvKTQAGGLRSLVWPGAVCGGRGS-----E-WTCVYVGWGVK-N 424 Chlamydomonas reinhardtii
Q4DHQ3       486 AFHNESsKTRTYVARSATWPGAFTYAVVElgqpgSqYQSVYIGTGLKsL 534 Trypanosoma cruzi
XP_001466588 597 AYEGEGsLTAVYVAKSLRWPGAATYAVTTagrpgAsYQMMYYGTGLKdM 645
XP_001700728 382 SSASEAvKTQAGGLRSLVWPGAVCGGRGS-----E-WTCVYVGWGVKna 424
XP_002675993 449 QTCHHK-SFKVVMLSSLRWQGAHTFYRNIgp--iChFGNVYIGYGIK-N 493
XP_002005830 599 TSRYTNqKERVLVMQSNIWPGAFTFIFEK-----T-CESIYLGWGHK-F 640
XP_001987084 599 TSKHTNqKERILIMQSNIWPGAFTFIFEN-----T-CESIYMGWGHK-F 640
XP_002063482 598 TSKYTNqKERMLVMQSNVWPGAFTFIFEQ-----T-CESIYLGWGHK-Y 639
Q4DE57       494 VNNNSK-KHRVVVVRSLRWPGAVAFAAEGg----KkWGCVYFGNGLN-K 536 Trypanosoma cruzi
Q9W1D3       596 TSKYTNqKERMLVMQSNVWPGAYTFIFEK-----T-CESIYLGWGHK-Y 637 fruit fly
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