4OY2


Conserved Protein Domain Family
TAFII55_N

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pfam04658: TAFII55_N 
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TAFII55 protein conserved region
The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. TAFII55 binds to TAFII250 and inhibits it acetyltransferase activity. The exact role of TAFII55 is currently unknown. The conserved region is situated towards the N-terminus of the protein.
Statistics
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PSSM-Id: 398370
Aligned: 127 rows
Threshold Bit Score: 109.14
Threshold Setting Gi: 514642891
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4OY2_D        27 IESGVILRILPdIQLEFVKNSLESGD---YSGISIKW-KNERHAVVTINDVXYGAILVDLPTVIEVNKSVDRKNLLKTFD 102 Saccharomyces c...
XP_001944364  11 LETEVILRVPS-EAAATLRELIKKd---aKEQISIKLeNDIRKGEVIIGNHHLFAKVVDLPTIIEGQKTIDNKTVYKTAD 86  pea aphid
EDX12036      23 LESQFIMRVPK-ELADTVHEAINAGTi--KERLTIQLdQDLRYGEVRIDDQILYTKLVDLPTVVESYKTIDNKSFYKSAD 99  Drosophila simu...
EFA00911      14 LECQFILRLPE-EPARVLREAIRNNst-lKDRVAIKIeNDMRHGEVRIDHWLLPAKVMDLPTIIESLKTIDSKGFYKTAD 91  red flour beetle
Q176B1        19 LETQIIMRMPV-EPARILREAIQTGAnnlKDRLSIRLdNDLRYGEVRFDHWLLHAKVVDLPTIVESLKTIDNKNFYKTAD 97  yellow fever mo...
ETN66016      18 LETQFIMRMPR-EPAGLLREAIQSGAnnlKDRLTIRLdNDLRYGEVRFDHWLLHAKVVDLPTIIESLKTIDSKNFYKTAD 96  Anopheles darlingi
OWR42999      14 LETQFIMRMPE-TPGKALSELIKSGen-fKNRLTIQIeNDMRHGEVRFDQWVLHAKIVDLPTIVESWKTIDRKSLYKTAD 91  Danaus plexippu...
XP_004929824  14 LESQFILKLPE-HPAKILRELLKSGen-lKNRLTIQIdNDMRRGEVRLDHWLMHAKIIDLPTIVESLKTIDGKSFYKTAD 91  domestic silkworm
EFN79745      19 LESQYILRLPP-EPARVLKETLNNGls-lKDRLTIKLeNDLRYGEVRLDHWLLHAKVVDLPTIVESLKTIDNKSFYKTAD 96  Jerdon's jumpin...
EEB15287      17 LESQFILRLPP-EPAKILRELIQSGAnnlKDRLSITIeNDMRTGEVRLDHMLLHAKVVDYPTIIESLKTIDNKTFYKTAD 95  human body louse
4OY2_D       103 VSQXL----------------LCirpiQEEEEV---YAlEApdtedlvvkhfegiedeiwenketflkgyngaplsdxea 163 Saccharomyces c...
XP_001944364  87 ICQMI----------------IC----KENEEFllsDE-DEkak------------------------------------ 109 pea aphid
EDX12036     100 ICQIL----------------IC----KEEREDet---eKEspn------------------------------------ 120 Drosophila simu...
EFA00911      92 ICQML----------------IC----KEEDDQtttD--EEspq------------------------------------ 113 red flour beetle
Q176B1        98 LCQLPlkildksigtprktsgICfstl----------------------------------------------------- 124 yellow fever mo...
ETN66016      97 ICQMM----------------IC----KEEPDQhsaE--EEspn------------------------------------ 118 Anopheles darlingi
OWR42999      92 LCQLM----------------IC----KEEADSct---eEEspt------------------------------------ 112 Danaus plexippu...
XP_004929824  92 ICQMM----------------IC----KDGPDQpiaE--EEipt------------------------------------ 113 domestic silkworm
EFN79745      97 ICQMV----------------IC----KEEDDHtatD--EEspv------------------------------------ 118 Jerdon's jumpin...
EEB15287      96 ICQML----------------LC----KEDDDQtttD--DEvns------------------------------------ 117 human body louse
4OY2_D       164 khlKEI---ALKGYDYKHGISPPLYNVRNRRFRRKXDPNEIDY--VEKVVDXLLKQDKQAE 219 Saccharomyces cerevisiae S288C
XP_001944364 110 vfkKKEpnkVDKKYLWPHGVTPPLKNVRKRRFRKTLRKKYVEApeIEKEVKYLLKSDSEAL 170 pea aphid
EDX12036     121 knkKKDpnkVDKKYLFPHGITPPCKNEVKHLLRMGGEEVRVDYeiINEEDKPMDELEQSdi 181 Drosophila simulans
EFA00911     114 kskRKDpnkVEKKYLMPHGITPPTKNVRKRRFRKTLKKKYVEApeIEKEVKRLLRIDNDAV 174 red flour beetle
Q176B1       125 tdkKKDpnkVDKNFLWPHGIT-ACKNVRKRRFRKTLKKKYVEApeIEKEVKRLLRVDNEAV 184 yellow fever mosquito
ETN66016     119 knkKKDpnkVDKKYLWPHGVTPPCKNVRKRRFRKTLKKKYVEApeIEKEVKRLLRVDNEAV 179 Anopheles darlingi
OWR42999     113 knkKKDplkVDKKFLWAHGITPPTKNVRKRRFRKTLRKKCTEGpeIEKEVKRLLRADNEAV 173 Danaus plexippus plexippus
XP_004929824 114 knkKKDpykVDKKYLWPHGVTPPTKNVRKRRFRKTLKKKFVEApeIEKEVKRLLRADNEAI 174 domestic silkworm
EFN79745     119 kqkKKDpnkVDKKFLWPHGITPSTKNVRRRRFRKTLKKKYVEApeIEKEVKRLLRVDNEAV 179 Jerdon's jumping ant
EEB15287     118 kakKKDpnrVEKKYLYPHGLTPPMKNVRKRRFRKTLKKKYVEApeIEKEVKRLLRVDNEAV 178 human body louse
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