5OQL,7MQ8,7MQ9


Conserved Protein Domain Family
Utp14

?
pfam04615: Utp14 (This model is not part of the current CDD release)
Utp14 protein
This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome.
Statistics
?
PSSM-Id: 516342
Aligned: 130 rows
Threshold Bit Score: 281.097
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5OQL_K        231 DALQSMIAGFAG--------------EDEESGGEGEAKP--------SGKQKLSLKDLGLVGVK-------DPD------ 275  Thermochaetoi...
Q9FNM8        112 SRMLKNVTELPIsafqge--sknkrvVFTEPYPESEFNPtrdvlegkS---LTTIDDFMEPLQGlh----gNSQ------ 176  thale cress
14_pfamImport   1 TRMLQSLTGMPSaafege--skskpvLFTEAYPEGEFNPtrdvlegkN---VLTEEDFLAPLEGtp----gYQK------ 65  
NP_567232     117 TRMLQGLTGMPSaafqee--skkrpvLYTEAYPESEFNPtrdvlegkG---LISVEDLLAPLEGkp----gFND------ 181 
XP_002467880  121 IRILQETTGMPReafdg-------------kkrkQPLELplqhgdgdG---PVTIHDLLDNVQGkp----gYSK------ 174 
EFJ25766      160 DRMLMEVTGKANrhak------kvkeDISYMDDKNE-------------EVPITVEDLLAPLQEkp----gFNA------ 210 
XP_024385192  173 QQMLEAVTGKPHqlrnddtaterkrdVRSEAFSESEFNLnsnvhgnsS---SITVADLLGGLEGas----gLGA------ 239 
XP_002185123   85 QYMLDMLDILGEdsskkns-reiktpQMAISVKESEFSAs------vLPSANLTLDSLMKGLEDtk----gFGV------ 147 
3_pfamImport    1 KNLGKMVDGLVEkr-----------sRKKLDEIDAQFANe-------sTEGELTLGSLLGAQTAkpgaeaaEEEeaeekt 62  
XP_002909545  101 KNLGEMVDSLVEkk-----------nKKKLEEIDSQFASe-------sAEGELTLGSLLGAQTLkpgaegaEEEeadekt 162 
5OQL_K        276 --------MKRSLRLMKKeekatkpGSSKKLEVPLAKRQQDRLMREAAYKKTNETLDRWIETVKHNRRAEHLVF-PLAQN 346  Thermochaetoi...
Q9FNM8        177 --------LSNMISRMRK-------DTQSLVHAPLPKPEQERLERDVANELVYKGFDIWVPLVKRNREAPTIYF---NQD 238  thale cress
14_pfamImport  66 --------TSKQIARMRK-------DTKHVVHAPLPKPQRERLERKAVIGLVDEEFSKWVHLVKKNREAPTVYF---NQD 127 
NP_567232     182 --------LNKRINRMQK-------DTQSVVHAPLPKPERERLERKAVKGLVEKDFNKWVHLVKRNREAPTVYF---NQP 243 
XP_002467880  175 --------IRKRLQQQE--------KKPMVVVAPLPKVERDKIERSVTFQKSKNELTKWEGVVKSNREAPVLYF---END 235 
EFJ25766      211 --------LKKRVRSLQ--------KSAAPVSVPLPKNIQEKIDRQAGYEKTVEDISKWQPIVKRNREASTLKF--IDK- 271 
XP_024385192  240 --------LRKNLQPLE--------NENLAISAPLPKVIQERMERKAGYDKSREEVTKWEPLVKQNREAPSIRF---NER 300 
XP_002185123  148 --------VQKTMKKI---------AQGHATAAPVARVVSERAQRKVHYEQQTKEVDKWIDAVQENRQAETLDFrP---- 206 
3_pfamImport   63 ktgldlrrVRQQVRQLEGd------GSTLTLQANRDPVNDARAQRKLAYVEKTKDVDLFEPVVRRNRQKETLDF-RVQA- 134 
XP_002909545  163 ktgldlrrVRQQVRELEGd------GTTLTLQADRDPVHDARAQRKLAYVEKSKEVDIFEPVVRRNRNKETLDL-RVQA- 234 
5OQL_K        347 ahdrglDAS---ELQPI-TQKTSGTELEQTILAIMEESG-LgptaKPEKKETSGE----AG-KQGMSKEEQKELIRQKRR 416  Thermochaetoi...
Q9FNM8        239 ------VNVgysTVGAIaSQFHPRTEFEMKMASLLDDHE-Il---EAHKEDGARL----LE-FNEVSMEDHIKRRNHVAK 303  thale cress
14_pfamImport 128 ------VDLgysTVGAIaSEFQPRTEFEKKMASVLNDSE--------------------------VSMEDHIKDHNHIAK 175 
NP_567232     244 ------VNVgysTVGAIaSEFQPRTEFEKKMASVLKDNE-Lg---EAHKEDGAKL----LE-LNEVSMEDHIKYRDHIAK 308 
XP_002467880  236 ------TNLgvnTVAAIaSEFKPRTEFEKRIAQITQSTE-Ii---EAHKKDGAKI----LE-LNKIDVEDVRERQNRLAK 300 
EFJ25766      272 ------VNValsSTTSMvADFKPSTAFEKEVAALLKENG-Va---DPSQIEAKES----LE-LNKLSVDEVRDRQERLAK 336 
XP_024385192  301 ------TTVattTVAGLaAKHTPVTDMEREVAAILEQSN-Mg---ITKDIEAAEA----LE-LNKLSVEEVKERQQRLSK 365 
XP_002185123  207 ------KERleiSRDVLvDKFVPTTDFEKQLHEALQEAGqLd---EEDMLRAEERalqdDLgANEITMEEYKQRRGQLAK 277 
3_pfamImport  135 ------PKLeklTPAALaSKFAPQTDMEKSVAALLQAGD-L----TDKKLAQDEEe--eLA-RKRVSTEEVAARQKELAK 200 
XP_002909545  235 ------PKLeklTPAALtSKFVAQTDMEKSVAALLQAGD-L----SDKKLAKDEEe--eLA-RKRVSTEEVVARQKELAK 300 
5OQL_K        417 ERELHSREMARLKRIKKIKSKTWRRIHRKELLKNEEaaYQAALE----AGeldseeEREALDRRRALERVGARHKE-SKW 491  Thermochaetoi...
Q9FNM8        304 MRSMLFRVDLKHKRIKQIKSKTYHRLKNKDLNQSGV-----GAFmepaMAk----eEAKKQEARRVKERMTLKHKNtGQW 374  thale cress
14_pfamImport 176 MRSLLFRHEFKSKRIKKIKSKTYHRLKNKDLKNSSL-----GALmdpeMAk----eEAMRQEAKRVEERMTLKHRNtGKW 246 
NP_567232     309 MRSLLFRHELKSKRIKKIKSKTYHRLKGKDLKKSAM-----GALmdpeMAk----eEAIKQETRRVEERMTLKHKNtGKW 379 
XP_002467880  301 MRSLLFRHEMKAKRVKKIKSRTYHRMLKKDKLKAAS----ADFEadpeAVk----dHARKQEFKRAEERMTLKHKNtSQW 372 
EFJ25766      337 MRNLLFRHEERAKRVKKIKSKTFHRLARKSQKTKAD-----MLAddpdVQl----eETMKQELNRARERMTLKHKNtSRW 407 
XP_024385192  366 MRSLLFQHEAKAKRVAKIKSKTFHRLDKSKRMRDFM-------EtdeeAAk----eAALKQEQKRAEERMTLKHKNtSRW 434 
XP_002185123  278 MRALMFYHEQKRHHMNKIKSKKYRRIRKKQRLRGKEgeLEAEMEenpdLVr----eLQEKEEVDRMKERMTLAHKNtSKW 353 
3_pfamImport  201 LRSLLFYEEQKKRRVKKIKSKLYHKIRNSQDKKAMEkqKEELRAldpeLArk----ldEELAEKRAEERLTLKHRNtSKW 276 
XP_002909545  301 LRSLLFYEEQKQRRVKKIKSKLYHKIRNAQDKKAMAkqKEELRAldpeLArk----ldEELAEKRAEERLTLKHRNtSKW 376 
5OQL_K        492 AKLGKKAGRavwDEDFRAGLAEMARRKDELRKRI-------EGLk------nGSDD----SSDDSD-GDEDasgdeaaeR 553  Thermochaetoi...
Q9FNM8        375 AKRMLSRGLnrkYDVTQAALSKQLQIHATLSRKMnstkdesSSDe--------------eDLNDGSdQDTS--------- 431  thale cress
14_pfamImport 247 AKRMISRGLnvkYDGPKAAIAEQLQMNANLSRKMnsmrdgsSSDe------sDDEE----EFNDGSdEDTP--------- 307 
NP_567232     380 AKRMLSRGLterYDGTRAAISEQLQINATLSRKMnstndgsSSDe------sDDEE----ELSCGSdQDTP--------- 440 
XP_002467880  373 AKRIIKRGLsvqDEGTRAAIAAQLQQNTLLTRKMnsmkddsSSEessd-ddeDESD----S---------E--------- 429 
EFJ25766      408 AKRILKRGLqqhNEGTREAITEQLREHALLTRKI-------HSAkse---ssSSDE----DEEDDSdKDDEpgl--vleK 471 
XP_024385192  435 AKRIIKRGLkahEDGTRDAIMEQLRAHSMLTKKI-------QSAgfsdseesSSSS----SEEEEDdKEGTst-----tK 498 
XP_002185123  354 ARRILKRGKn-vDVDTRRALSAQNKRGDELLKKMy------SGSgeedgddsDSEDlieaARKVLQdTEEEev------- 419 
3_pfamImport  277 VKHQLRRGIn-aDDATRSAIADQLRRGEDLRRKM-------NAVd-------SDDD----GMDDDDdDDDEgd----aaS 333 
XP_002909545  377 VKHQLRRGIq-aDDATRSAIADQLRRGEELRRKM-------NAVd-------SDDD----MDEDEDeDEEEgd----aaS 433 
5OQL_K        554 --RKLLAELEKAAAYSd------dDEPHSKLFQLKFMQRGEELRR----KENEELIAQI---RRELD-SDYDG-SEPdev 616  Thermochaetoi...
Q9FNM8        432 ---KLIAEAKEKILKTvd----ddEVPISRLMSLPFMARAVKKKNeeakEEGKRDIEEL-------EkFGGAEtSKKstn 497  thale cress
14_pfamImport 308 --SRLIAKAKEKTLKAle----ddEVPNAGLMSLPFMARAMKKKNeeanEEAKRALEEY----EEWEnSGGENsKKTvn- 376 
NP_567232     441 --SKLIAKAREKTLKTme----ddDVPNSGLLSLPFMARAMKKKNeeanEEAKRAFGEY----KELEnFGGEDnPKKsad 510 
XP_002467880  430 --AKILNRGKEKILKAlee---dnEIPNSGVFSLPFMERAMKKREeatyEEARQALEEYddsLQKLEeNNTKQnDDSik- 503 
EFJ25766      472 pgSRVLAKAKVATLKAleegtndtELPTTGIFALPFMVRAIEKKR----KEAEDEARAV---LEELEsAGADDaGPSqet 544 
XP_024385192  499 gkSRLLAKAKAATLEAlqfd-deaEVPQTGLFALPFMARAIEKKR----NEAREEALAI---LEQLEqAEADEgADGgga 570 
XP_002185123  420 ----------------------agSSKGKGLLNLSFMQRGIEKQR----EKAKEEARQLlleLEANErIETSDnDGDtnm 473 
3_pfamImport  334 rlQKRLEKQASALVTEidad-saeAGKKRGLQGMKFMQRAAEKQR----EKSRLEAEKL---LREIRnGDGPDgDRIl-- 403 
XP_002909545  434 rlQKRLEKQASALVTEided-saeAGKKRGLQGMKFMQRAAEKQR----EKARSEAEKL---LREIRsGDGADgDRIl-- 503 
5OQL_K        617 --------------------------eiGRRTF-----GMGKK---DKTEQQQ--AQDQLARMQAAEARKEKAAARVAAA 660  Thermochaetoi...
Q9FNM8        498 --------------------------vvGRRVF-----GAe----aPKESEKEsdNLFDNSDSSDN--DMEDN------- 533  thale cress
14_pfamImport 377 --------------------------vsGRRVF-----GATAKveaPKESRKDsdNFYDDSDSDNDMAGIEDN------- 418 
NP_567232     511 --------------------------vsGRRVF-----GATSKveaPKESKKDsdNFYDNSDSDNDMEGIENN------- 552 
XP_002467880  504 --------------------------vsGKRTF-----GPVKNtheEVKKR-KlqDTENSSDSEYDS-EPAQHlsnn--- 547 
EFJ25766      545 g------------------------plkGKLSF-----GGHADkvsAMKAIDEedDMVERGTDSENSEDESPLmgtk--- 592 
XP_024385192  571 dhedrr-------------nkieeaghsGRLAFgdlavSSKAEnvkRSKTKRNsdDYSDLELDKEDNDDDSDGVSEEDDT 637 
XP_002185123  474 nskkkkrvagaaemkavlkegalvvsslQT--------GGSASvamSGGIDINsdFADQNEAKMSSYASEHTAALSLGNS 545 
3_pfamImport  404 ----------------------------SE--------GEDYLnsdDEGVAKK------KTKKNVVVTEQDKQAVDRALA 441 
XP_002909545  504 ----------------------------SE--------GEDYLssgDEGAKKS--KKSAKKTKQVVATEQDKAAVDRALA 545 
5OQL_K        661 Eetv-------------------------------------------------kqEAREKAEK----------DEASAPS 681  Thermochaetoi...
Q9FNM8            --------------------------------------------------------------------------------      thale cress
14_pfamImport     --------------------------------------------------------------------------------     
NP_567232         --------------------------------------------------------------------------------     
XP_002467880  548 ---------------------------------------------------------------------evtmKHDDIQF 558 
EFJ25766      593 ---------------------------------------------------------------------mllvTRKEKKR 603 
XP_024385192  638 Kkrrfq--------------------------------------------mhpakKAFSKSEAkssiddksqsSSDPTKS 673 
XP_002185123  546 Pky---------------------------------------------------iQPRQLVKPmekkgsntqdLCPQPDN 574 
3_pfamImport  442 Rgalqtasvsmsggvsarasgaiaidlg-dggnsvalangdkkqgkelqlgaktpAQKSAQAAsaktdaedsdMEPAAEG 520 
XP_002909545  546 GgalqtanvsmnggvsarasgaiaidlgdggsgvalangdkkqskklelgakstqEKTTVVETqartdtedadMEPAAEG 625 
5OQL_K        682 TAGAW---SQ------------PKve---------------agAWSKPDDEGSSK--PRKAPKGrpeeidvtdlalagkp 729  Thermochaetoi...
Q9FNM8        534 ELEAVkdnASparntetimeaeKLddiagnpas-kttfdvalyASGSWKKMTGCKnaESKKASKthvpisqsqdkkessd 612  thale cress
14_pfamImport 419 NIEPVrdnASparnt--iteaeKFdddvagnpaskttfdvamfASGSWKKMTGSKntESKKAPKktrapipqaqdkkgpr 496 
NP_567232     553 DLGAVgdtASparntgaiteteKCcgdvenpas-kttfdvalfASGSWKKMKGSQnaESKKAPKtrvpiskgqdkkesrd 631 
XP_002467880  559 GNALLddePQndm------yrsFNdiiknpgpk--ttfevgmlAGDSWKKVKSNKgnDQ--SNGngitnksklpvpsivd 628 
EFJ25766      604 KSDPVpvnAVdiedv---dlegMVsaavehttk--vdepitiaGDKSERTKKKKKkkSKNKESAtrledamgvevtkhsv 678 
XP_024385192  674 SKESSlpeESsrkrk---krnkKNkgpqttase--nsdqvdctKDTSAASEPAGKqnNKKKKKTdsthpttgseslqgkd 748 
XP_002185123  575 EVNPWl-------------------------------------------lLKSQGneVSDTASMtsrpgigaklslsnqa 611 
3_pfamImport  521 EENPWl-----------------------------------------sSTATKSKarSKKSKKKtqqknagsqpdvaaai 559 
XP_002909545  626 EENPWl-----------------------------------------sNAATKSKr-SKRNKKKtqskgaqadvaaaies 663 
5OQL_K        730 akakangqaksqvqgkahas-----------------ngqssssqkastsvaitgaeedgndsddsdavhlpmAIRDRAL 792  Thermochaetoi...
Q9FNM8        613 sesddses-----------------------------------------ddseseaeqmvdgiltcgsketyeIPCQAEL 651  thale cress
14_pfamImport 497 deesgd---------------------------------------------seseaeqmvdgvltsasketfeVPSQAEL 531 
NP_567232     632 eeseds----------------------------------------------eseaeqmvdgiltsasketyeIPSQAEL 665 
XP_002467880  629 pkpkqqdhs----------------------------------------sdsdseeemvegfltvsdrkenyeLPSQEDL 668 
EFJ25766      679 isanptvfgtdevarpetnsksvadesf--kvaiagrpkdtshkqdkktvpeqensveeqeedldydgdevivPRSQEDL 756 
XP_024385192  749 pqtntsgviqvsvfnmktgfqssisaaanpsaaatpdkdtevgkpklgqatsfldldddddaptnnglellgkGTSQQDL 828 
XP_002185123  612 lvidpekavymm----------------------------------eqkgdtelsvnkiftndvvtstekkitMLTQEEL 657 
3_pfamImport  560 eslaqdtkeaskeeasiatltngsa--------kakngkkrkldqaktgaeeevepaapssqkknkkakkdtkAADQDEL 631 
XP_002909545  664 laqdtkesrkedsaiatltss----------------sktskkrkldqskteptevevvsdkktkkkakreakAAGQDEL 727 
5OQL_K        793 IERAF---AGDDVAAEFEKEKAEIEADDDEk----EIDN--TLPGWGSWVGEGVSNRE--KRrhq------grfVTKV-E 854  Thermochaetoi...
Q9FNM8        652 VSRAF---AGDDVEGDFEKDKQEVLNQEVP-----EPEKpvQVAGWGHWTNNQNKRGL--PSr-----------IVREhE 710  thale cress
14_pfamImport 532 INRAF---AGDDVLDEFEKDKEEVLNQEVP-----KPEKpvLVPGWGDWTNIQKKRGI--SKq-----------MVQKhE 590 
NP_567232     666 IQRAF---AGDDVVEEFEKDKQEVLNQEVP-----EPEKpvLVPGWGQWTNVQKKRGL--PSw-----------MVREhE 724 
XP_002467880  669 IRQAF---AGDDVEAEFEKDKMDVLNEENP-----EPEKpaLVPGWGQWTDIQQKKGL--PSw-----------MIKEhE 727 
EFJ25766      757 IREAF---AGDDVEAEFQEAKAAAVDEECPq----EELErmDLPGWGQWTDIQKKRGP--PQw-----------MLKQqE 816 
XP_024385192  829 IRQAF---AGDDVEADFQDAKARVLGQETVq----VEESk-tLPGWGQWSHIQKKRVQ--SSw-----------KEDLe- 886 
XP_002185123  658 VRKAFaapSDKEIEEEFANEKDAIQDSEDPtrtrkKDKLsnTVSGWGSWTGKGAPPPKppKKiprhllppeqklSKRK-- 735 
3_pfamImport  632 VRRAFefvAEGE--DELAQEKDRLAGQDADakkgaEIAKlvGMSGWGNWAGDGIRVSK--RQv-----------AREKqA 696 
XP_002909545  728 VRRAFefvAEDE--DELAQEKGRLASQDADakkgaEIAKlvGMSGWGSWAGDGVRVSK--RQi-----------AREQqA 792 
5OQL_K        855 GI--KKe------kRKDYKLKDVIINEKRVKKN-DKYLATGLPHPFESQQQYERSLRLPVGPEWMTKETFQDATKPRVII 925  Thermochaetoi...
Q9FNM8        711 EA--KKtreqalrkRKDASFKHVIISEKVDKKA-EKLQTKSLPYPYTSKEVFEQSMRMPIGPEFNPTTIVGVLNRPEVVK 787  thale cress
14_pfamImport 591 AE--KKeweqglktRKDARLKHVIISEKVDKKA-EKLHTTTLPFPFTSKEVFEHSMRMPIGPEFNPSTIVGELNRPEVVK 667 
NP_567232     725 DA--NKkrkldlktRKDYRLRNVIISEKVDKKA-DKLHTTTLPFPYTSKEVFEHSMRMPIGPEFNPATIVGALNRPEVVK 801 
XP_002467880  728 VA--KRnrqealkrRKDSKLKHVIISEHVDKKV-EKYLARNLPFPFTSKDAYEQSIRMPIGPDFNPAISVSALNRPAIVK 804 
EFJ25766      817 EA--KRkkeeaekrRLDAKLKHVIISQKTDKKA-AKFLSSSLPFPYTSREVFEKTMRMPLGRDYNPTKAFQDLTRPSIIK 893 
XP_024385192  887 ----KKrreeaikkRQDAKLKFVVISEKTDKKA-AKYHTSTVPFPMKTKEVFEQSLRMPIGREYNGEKVFRDMIRPAELK 961 
XP_002185123  736 --------------REDATKPNVIISEKRIRRTaDKFMISQIPYPYTSREEYERAMVGGLGREWNVTSSMKDMTRPEIMT 801 
3_pfamImport  697 KQvaREakqkalagRKDARLEKVLINEKKDKKA-AKFTVKDVPYPFTSRAEYEAAMRNPLGSDWNTAQVTNVLTAPKIMK 775 
XP_002909545  793 KDiaREakqkalagRKDARLEKVLINEKKDKKA-AKFTVKDVPYPFTSRAEYEAAMRNPLGSDWNTSQVTNVLTAPKIMK 871 
5OQL_K        926 KQG-IIAPMSKP 936  Thermochaetoides thermophila DSM 1495
Q9FNM8        788 KAGvIIKPVKFE 799  thale cress
14_pfamImport 668 KTGvIIKPVKFE 679 
NP_567232     802 KAGvIIKPVKFE 813 
XP_002467880  805 KPGiIIKPIQYE 816 
EFJ25766      894 RAGvIIDPIEYE 905 
XP_024385192  962 SAGvIIDPIKLN 973 
XP_002185123  802 RSGkVIQPISKK 813 
3_pfamImport  776 RAGtAIAPLALS 787 
XP_002909545  872 HAGtAIAPLTLS 883 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap