7MKN,3H0G,6RFL


Conserved Protein Domain Family
RNA_pol_Rpb2_3
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pfam04565: RNA_pol_Rpb2_3 
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RNA polymerase Rpb2, domain 3
RNA polymerases catalyze the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Domain 3, s also known as the fork domain and is proximal to catalytic site.
Links
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Statistics
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PSSM-Id: 428011
Aligned: 102 rows
Threshold Bit Score: 65.6253
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
7MKN_C        511 QFMDQNNPLSEITHKRRISalgPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQ 578 
Q8SSB7        436 ITAERINFYKYLSHFRGVN---RGTHIPSM-VTSIRKLRPESWGFLCPVHTPDGAPCGVLLHMAKEAE 499  Encephalitozoon cuniculi
XP_001708931  471 VLADRINYVRFLAHFRCIN---RGNAFATHKITSIRKLYPESYGFQCAVHTPDGAPCGILTHLCYKAT 535 
XP_007604601  432 VLAERINIWRFTSHFASVS---RGTFFSNLKITSIRKLRPESWGFFCPINTPDGAPCGLLFHLSQSCF 496 
XP_001827933  443 FLSGRINYWEFASHFYSVS---RGAFFSNLKITSVRKLQPESFGFFCPINTPDGSLCGLLTYLTQQCE 507 
XP_008074363  406 VLAERINTYRFISHFESVN---RGAFFAMLKTTSVRALRPESFGFLCPVHTPDGAPCGLIVHMAMDAi 470 
EOB12651      417 ILAEKINYYRYISHFRSVN---RGTFFQQVRTTTVRKLRPESWGFMCPIHTPDGTPCGLLTHLTTSVE 481 
EEQ82614      419 IMAERINFYRYISHFRSLN---RGSFFQEVRTTGVRKLRSESWGFFCPVHTPDGTPCGLLTHLTSAAS 483 
EJW02400      473 TLAERINFFRYLSHFRSVN---RGNFFAQLKTTTIRKLRPESWGFYCPVHTPDGSPCGIITHLAHTTK 537 
CBN75850      408 IVAERINFLRYLAHFRSVH---RGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACK 472
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