8UK6


Conserved Protein Domain Family
tRNA_synt_1c_R1

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pfam04558: tRNA_synt_1c_R1 (This model is not part of the current CDD release)
Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1
This is a region found N terminal to the catalytic domain of glutaminyl-tRNA synthetase (EC 6.1.1.18) in eukaryotes but not in Escherichia coli. This region is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function.
Statistics
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PSSM-Id: 516312
Aligned: 115 rows
Threshold Bit Score: 129.988
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8UK6_A        29 EELVSLFSKAGFEEKKSAEIVKNKKVASALYNILGS--NfPKT------DDKKLSLLHQLAiHESKn---GKVPNHDFII 97  Candida albicans
KDE04446      11 EDLCHYFQRCGLSEVRSTETVRS-KTSLTVESFFRK--H-ELErk--slSDKQALLMLQLV-KEAGk---VGQGGQAYLV 80 
EGU13638      11 EELAAFFQRAGLSEQRAKETARS-KTAPAARSLFEA--A-RLDts--plEDKQGALVLQVA-KDGQa---LSDEARLYIV 80 
XP_007329315   9 EPLVNLFQSIGLTQSKALEAAKSAKPAAILKEIIDE--N-DIVak--gsDEKRAGLLVALS-NALSkspgISKPGKDYVL 82 
XP_003036718   8 AEHVPLFEAIGLPHAKAVEAAKSAKQAAALKDIIEK--Y-QLDkrepklEEKQAGLISALA-GQVAkapdTTEEARDFVV 83 
XP_011388190  13 ARLLKLFESLNLTGNRAIETLTNPKHVAAIESVIAH--N-HLTnk--qiDPKASALIISAS-TAKDa---SNQPARDYIV 83 
XP_001731464  13 ARLIELFATISLTGQRAADTIKNPKYARALEHTITA--L-QLDrq--glDAKTGSAVVVAA-SSGAe---LPEAKLDYIV 83 
XP_007406014  11 DELITKLKALGLPEKQAIDTARNTNLANQFIHF-----N-QIEsnpsslPSKHATLLLKWStGCISklkdQSDERKLFGA 84 
Q584F6        83 EIITKLREVVGLDEKNAKDLSTKPERVTDLLEFFGV--Q-GITaa---sPREQKVMMFNIW-TKVKl-----SEHRDHIA 150 Trypanosoma brucei
XP_003888727   7 EGLAKKLQDLGLLEKQALDTARNVPLATQYISFIESptA-STAst--piDKSKASLLLRWStVVVSklkdKSTERKQIGA 83 
8UK6_A        98 DGIQKGDLKTALQVTEGIKYL---QNNATVDKEKFDEASGVGIEITPEEAKVEISKYLdSIKTDLESKRY-SILPKVLGE 173 Candida albicans
KDE04446      81 GRVQDGALERAEQVTAAVKYLs-sHPGPEVDEAEFNKACGVGFSATPEQVLFAVRAYVnAHKDEITKLGW-PGINKISAQ 158
EGU13638      81 EAVRDGRLSKSDQVTAAIKFMg-aTV-PPVDQAAFDEACGVGFTITPDELDRRVHAYLtTHDAEVSKTGW-GGFSKTSGL 157
XP_007329315  83 DKILNGDLKSVDQVNAAVKYVd--TNSIPIDDADFNKACGVGFSITPKELLDQVQNYLaSNPATG----W-TSLGTTLNV 155
XP_003036718  84 DKILEGKLKTTDQAVAAVKYVe--TRPPPIDVQDFDKECGVGFSITPEELYKQIAEIAePSASKG----W-AGLGAVISA 156
XP_011388190  84 SRILDASLTSSDQVNAAYKYLs--SLNSEPDKAAFDKECGVGVVVTPQQSRKAVDDYIaSHRSELDPVDGwPKLGSILSG 161
XP_001731464  84 QRVLKKDLVSTDQIQTACKYA---ASVDAIDDATFDSQCGVGVVITPDMCHNVVRNYMqSHHADIAEAAGwPKMSSIMAA 160
XP_007406014  85 KKIVCNDLITTLQVDAALEYLs--KGDGPVDETEFNQKCGVGISMKKEEVKTIVENFI-KQFELAQTSKW-AALGKTTGE 160
Q584F6       151 TYVKNNKLDSTQKVDAAVRFVnalKANAAFEVAKFEEECGVGVVLSRDDTVRLVKEALeAEDPKVLKASWvKNPNMLIGK 230 Trypanosoma brucei
XP_003888727  84 QHILNGNLASPAQVDAALEFLs--VGDGTVDEELFKRECGVGISMTKEEVKAIVMKYV-ASSEKAKESKW-ASLGKTTGE 159
8UK6_A       174 VKt-qPSLKWAPP 185 Candida albicans
KDE04446     159 LKsndDFLRWVNM 171
EGU13638     158 MRq-dDSLKWVNP 169
XP_007329315 156 LRg-sSEFRWANP 167
XP_003036718 157 AKa-vPSLRWANA 168
XP_011388190 162 VKa-sPDMRWANA 173
XP_001731464 161 VRa-ePTLRWANA 172
XP_007406014 161 LKk-lDTLLWCNP 172
Q584F6       231 VKr-aKGLQWADI 242 Trypanosoma brucei
XP_003888727 160 LKk-lAVLKWCNP 171
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