Conserved Protein Domain Family
XhoI

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pfam04555: XhoI 
Restriction endonuclease XhoI
This family consists of type II restriction enzymes (EC:3.1.21.4) that recognise the double-stranded sequence CTCGAG and cleave after C-1.
Statistics
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PSSM-Id: 487198
Aligned: 4 rows
Threshold Bit Score: 366.853
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q72WR9        29 KQLESGKTDQGERAGVTAGKNMDGFVELVLDIVRANGLAHADIHQNKGLLtLPGFFRPTKLWDLLVISEGQLIAAVEFKS 108 Desulfovibrio v...
Q7N3K6        29 KQIESGKADQGERAGVTAGKNMDGFLALVLDIIKANGLAHAEIHQNRAMLtLPGYFRPTKLWDLLVLYKGQLIAAIELKS 108 Photorhabdus la...
WP_014585740  14 dQERRGGSDQGARSAVTGGKQMDGFVRKIIELMTASGVDEGNIYTKKTH--LPGFFRPVKGWDIVVVVDGVLMAAIELKS 91  Methanothrix ha...
WP_004073067  30 KQKKSGKVDYGLRGAVTGGAQMDGFIELFARLIISTGLDAHFIQRKGALD-LPGYFRPTKEWDLLVVKDGKLIAAIEAKS 108 Desulfobacter p...
Q72WR9       109 QVGPSFGNNFNNRAEEAIGTAHDFWTAYRDGAFGEQPRPFIGWLMLVEDAPASRAAVQECSPHFPVFLEFKGASYIKRYD 188 Desulfovibrio v...
Q7N3K6       109 QVGPSFGNNFNNRTEEAIGTAHDLWTAFREEAFGKQPRPFVGWMMMVEDASESRKSVRDSSPHFPVFEEFKGASYLKRYD 188 Photorhabdus la...
WP_014585740  92 QVGLSFGNNFNNRTEEAMGTALDIWTAYREGAFCTSPAPWLGYLFLLEDCPESRSPVRTQETHFPVFEEFRGASYAKRYE 171 Methanothrix ha...
WP_004073067 109 QVGPSFGNNFNNRTEEAMGSALDLWTAYREGAFHTSPQPFLGYFFMLEDCQASTRPVRVREPHFHVFPEFKGASYMKRYE 188 Desulfobacter p...
Q72WR9       189 ILCQKLMHERLYTTASVIASPKNNCRLGQYSS 220 Desulfovibrio vulgaris str. Hildenborough
Q7N3K6       189 LLCQRLVQEQLYTTAAVIAAERSAVNTGDFAE 220 Photorhabdus laumondii subsp. laumondii
WP_014585740 172 LFCRKLVRERQYNAACFIIADREKSNsfesyi 203 Methanothrix harundinacea
WP_004073067 189 IFCRKLVLERHYTASAFITSNRTDGPEGIFST 220 Desulfobacter postgatei
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