Conserved Protein Domain Family
BEX

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pfam04538: BEX (This model is not part of the current CDD release)
Brain expressed X-linked like family
This is a family of transcription elongation factors which includes those referred to as Bex proteins as well as those named TCEAL7. Bex1 was shown to be a novel link between neurotrophin signalling, the cell cycle, and neuronal differentiation, suggesting it might function by coordinating internal cellular states with the ability of cells to respond to external signals. TCEAL7 has been shown negatively to regulate the NF-kappaB pathway, hence being important in ovarian cancer as it one of the genes frequently downregulated in this cancer. A closely related protein, TFIIS/TCEA, found in pfam07500 is involved in transcription elongation and transcript fidelity. TFIIS/TCEA promotes 3' endoribonuclease activity of RNA polymerase II (pol II) and allows pol II to bypass transcript pause or 'arrest' during elongation process. It is thus possible that BEX is also acting in this way.
Statistics
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PSSM-Id: 516300
Aligned: 61 rows
Threshold Bit Score: 60.3716
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_012668637   1 MEKLYKENEGKpDNEENLENEI-KPEDEgssddeengdkkkpevnkkpeyegkledegepDeegqedegkqekqgksege 79 
XP_008508744  14 MKNTNQENEKK-DEKEQDANKG-EHLAl---------------------------------------------------- 39 
XP_003802562  14 MDNTNQENEEKa-EKEQDANKG-EP-LA--------------------------------H------------------- 39 
Q3MKQ1        14 MENDHQEKEEKe-EKPQDANKR-EPVVA--------------------------------L------------------- 40  Norway rat
Q9BXY8        14 VENVNQENDEKd-EKEQVANKG-EP-LA--------------------------------L------------------- 39  human
XP_012668634  14 MENAQKKHEGKe-EKDQVANKGeEP-LA--------------------------------L------------------- 40 
XP_008271337  12 MENAQKEKE----EKRQITNKE-EP-MA--------------------------------L------------------- 34 
XP_006163610  14 VENGNKEDEGKd-EKEQDANKG-EP-MG--------------------------------R------------------- 39 
XP_006082359  14 VENANQENEIKd-EKEQDANKG-EP------------------------------------------------------- 36 
2_pfamImport   1 MENTDQENKKYd-EKEQSTNKG-EP-LA--------------------------------L------------------- 26 
XP_012668637  80 gkpqgegktesqakpesqapaaekrPAEDYVPRKAKRKTDRGrTDDSPKDSQEDLRERHLSSEEMMREyGDVSRGQEELK 159
XP_008508744  40 -------------------------PLETGECGVPRGNRGQIhVRQSILQYRWDMIQRLEEPQARMRE-ENMERIGEEVR 93 
XP_003802562  40 -------------------------PL---EYSVPRGNRRRFrVRQPILQYRWEVMHRLGEPQARMRE-ENMERIGEEMR 90 
Q3MKQ1        41 -------------------------PFEAGEYYVPRGSRRRFrVRQPIAHYRWDLMHRVGEPQGRMRE-ENVQRFGEDMR 94  Norway rat
Q9BXY8        40 -------------------------PLNVSEYCVPRGNRRRFrVRQPILQYRWDIMHRLGEPQARMRE-ENMERIGEEVR 93  human
XP_012668634  41 -------------------------PLETGEYCVPRGNRRRFrARQPILQYRWDMMHRLGEPQARMRE-DNMERIGEEVR 94 
XP_008271337  35 -------------------------PLEAEEYLVPRGNRRRFrTRQPIVHYRWDMMHRLGEPQARVRE-ENMERFGEELR 88 
XP_006163610  40 -------------------------PLEAGEHCVPRGNRRRFrVRQPVLQYRWDTLHRLGVPQARMRK-ENMERFGEEVR 93 
XP_006082359  37 -----------------------------GEYCVPRGNRRRFrVRQPVLQYRWDGGQRLGEPQARMRQ-ENRERVGEEMR 86 
2_pfamImport  27 -------------------------PLETGEYCVPRVNRRRFrVRQPILQYRWDVFQRLEEPQGRMRE-ENMEKIGEEMR 80 
XP_012668637 160 KK-QKMGGFHWMQ--------RDVQDSFSPR 181
XP_008508744  94 QLrEKQLSHSLRAvs----tdPPHHDHHDEF 120
XP_003802562  91 QLmEKLREKQLSHslravstdPPHHDHRDEF 121
Q3MKQ1        95 QLmEKLRERQLSHslravstdPPHHDHHDEF 125 Norway rat
Q9BXY8        94 QLmEKLREKQLSHslravstdPPHHDHHDEF 124 human
XP_012668634  95 QLmEKLREKQLSHslqavstdPPHHDHHDEF 125
XP_008271337  89 QLmQKLQEKQLSHslravstdPPHHDHHDEF 119
XP_006163610  94 HLmEKLREKQLSHslqavsldPPHHGHRDEF 124
XP_006082359  87 QLmEKLRGKQLSHslravstdPPHHDHHDEF 117
2_pfamImport  81 QLmQKLKEKQFSHslqavstdPPHRDHQDEF 111
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