Conserved Protein Domain Family
Herpes_U44

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pfam04533: Herpes_U44 
Herpes virus U44 protein
This is a family of proteins from dsDNA beta-herpesvirinae and gamma-herpesvirinae viruses. The function is not known, and the proteins are named variously as U44, BSRF1, UL71, and M71. The family BSRF1 has been merged into this.
Statistics
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PSSM-Id: 282401
Aligned: 3 rows
Threshold Bit Score: 257.615
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O36405   1 MasRWMEWTCCG-----LWLFGKPTQKKYTQLfeepsykCS--ERVKQEINKGLPP-----GVSVGDLILGDKSTEALNQ 68  Alcelaphine herpesvir...
P52546   1 M--PLGYWGVMGncfrrLSLFGQPTQANYEML-------CSsdDLESEELTYFLDMtykdfGVYQNDIISHQKDTETMKT 71  Human herpesvirus 6 s...
F5H9W9   1 MssPWYTWTCCG-----INLFGRGNHA-YKRLgdp-legCP--ERWRQEIDLGLPP-----GVCLGDVVQSNLGTTALHQ 66  Human herpesvirus 8 s...
O36405  69 ahLLAL----QSNNITEYLARFNAAEIP-----ASCQGIVSNQiDKLKAMQSVIWNAMIsiatSNVELSDSGFQLLLDKQ 139 Alcelaphine herpesvir...
P52546  72 --LLGLlpmyKKTKLRHTIMERCLSNCPnhvkdALCVELMKAE-KILQTMDVVFMKTLI----GEFSMCTDNLNQLLNKF 144 Human herpesvirus 6 s...
F5H9W9  67 tyLLAV----QSNKITDYLKRFDVAKIP-----AGCQETVKTQvKKLQSIQNVVWNTMLalavGEITVDDSALQSLLNKR 137 Human herpesvirus 8 s...
O36405 140 ACENMTLMEMEKLATAISVD--NTTNWAREISNiIITQPT---HALP--EAVPEKPEPIYDDPeelestmllqPTQQKKT 212 Alcelaphine herpesvir...
P52546 145 ATDQSTLSDVEKINSLIEIDgeNSKRLLVELDP-ILHEETglyQALP--NVVTEAPSEKVKSI----------HVESEGE 211 Human herpesvirus 6 s...
F5H9W9 138 AGECVSLMEMEKLATAMASD--DSVIWASEISH-SLSEPT---SVLPltPAVTRQPEATLPKP----------PTEDPSV 201 Human herpesvirus 8 s...
O36405 213 TV 214 Alcelaphine herpesvirus 1 strain C500
P52546 212 SV 213 Human herpesvirus 6 strain Z29
F5H9W9 202 SA 203 Human herpesvirus 8 strain GK18
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