Conserved Protein Domain Family
Phage_rep_O

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pfam04492: Phage_rep_O 
Bacteriophage replication protein O
Replication protein O is necessary for the initiation of bacteriophage DNA replication. Protein O interacts with the lambda replication origin, and also with replication protein P to form an oligomer. It is speculated that the N-terminal half interacts with the replication origin while the C terminal half mediates protein-protein interaction.
Statistics
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PSSM-Id: 398275
Aligned: 19 rows
Threshold Bit Score: 84.9747
Threshold Setting Gi: 157083351
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015843206           5 QKENGYTPIAHEILDEIC--FRKFNATQLRIIMKVWRLTYGYNRKDHDFSNSFLQMTTGISEA-----SIKREVTALIKS 77  Paeniba...
Q2SPC4                40 DLDNGYTRVANELLNALA--RIDLSGREFKIVNAVMRKTFGFNKAMDWISLEQLVEMTGISRR-----HLPSLITGLVRA 112 Hahella...
jgi:Mahau_2926        12 DIEDGYTPLANLILEALA--MARISGVQKGICMFLFRRTYGWGIKEDSISLKEFAEAVDTSPS-----YVSKQLKQLIEW 84  Mahella...
Q8ECY6                21 DLEDGYLRLSNTLVDALC--RTKLSDRESRVVFAVIRRTYGYGKATDWVCLEQLADMTGITTS-----NICHAIKSLTAR 93  Shewane...
Q8XEZ2                26 DLENGYLRLANQIQDALC--IVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVK-----HVSEAVLSLAYR 98  Salmone...
Q3ABH7                 4 pQPDEFTRISNELYTAIM--QADFTKRQRNIIDLVIRMSYGCGKKSAILRPVDF-ELVGVYKT-----HVRKELDYLVKA 75  Carboxy...
zhongguo:PM3016_1445   5 qTENGYIRIANEIWDEVI--RRDFSKRQKDIMHFIWRLSYGCRKKAAFIPKLVHFELCGVGKN-----HIKDELLYLESC 77  Paeniba...
WP_015592072           5 QLENGYIRIATELIDEVI--RRDFSKRQLAILHFIIRLSYGCHKKDCVIEKFNSFELAGLNKS-----DIKKELKFLRDC 77  Bacillu...
CASKLGSI:C427_2395    18 DLKNGYTQVAHDIFDTIIsnQSKLTAVEMRVVLAFARKTYSFHKKSDWVTNTQIMDMTNLSKG-----HASNIIKSLISK 92  Paragla...
AJA73346              25 SVDDGYTQIPNELLKAIL--RSGVLGWKGSYLLATVLKTLSWHKESDWFTHSQVCEMMNIEPTkyhinQLSAARKELIRE 102 Mannhei...
WP_015843206          78 KVLKVTKqatsteaRKVSFNKDYEQW 103 Paenibacillus sp. JDR-2
Q2SPC4               113 KVIRREGes---nvKKYAVNTRLGEW 135 Hahella chejuensis KCTC 2396
jgi:Mahau_2926        85 SIIIRTSye----pGKVPtytfntrv 106 Mahella australiensis 50-1 BON
Q8ECY6                94 DIIIKDG-------RKVGVNQIVSAW 112 Shewanella oneidensis
Q8XEZ2                99 NIIILRRig---qtRYIGINTNLDKW 121 Salmonella enterica subsp. enterica serovar Typhimurium
Q3ABH7                76 KVLIIDG-------NRISINKDYDQW 94  Carboxydothermus hydrogenoformans Z-2901
zhongguo:PM3016_1445  78 KVLFWDRe-----aKLFEVNKNYDEW 98  Paenibacillus mucilaginosus 3016
WP_015592072          78 RVINWDEe-----tMIFSINKDYEKW 98  Bacillus sp. 1NLA3E
CASKLGSI:C427_2395    93 NVLFKDG-------KKTGINSTVSEW 111 Paraglaciecola psychrophila 170
AJA73346             103 NILFEDG-------KETGVNLSVFEW 121 Mannheimia phage vB_MhS_1152AP2
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