6V8O


Conserved Protein Domain Family
SWIRM

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pfam04433: SWIRM (This model is not part of the current CDD release)
SWIRM domain
This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Statistics
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PSSM-Id: 516242
Aligned: 212 rows
Threshold Bit Score: 40.2586
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6V8O_I        90 DI--SKIHEIEKRSNPDFFndssrfKTPKAYKDTRNFIINTYRLSP---YEyLTITAVrrnvamDVASIVKIHAFLEKWG 164 Saccharomyces c...
EME47931     333 DPnrEHLHVQELEVAAVLR------LPCNKYLANKRRVFNERLKSLregRD-FNKTSAqnvtkiDVNKASRMWQAFDNIG 405
XP_003855093 448 DPdrLHLHPQELKVASKLR------LHGNEYLLNKRRIFAAKLKSLqegTA-FNKTSAqnatsvDVNKASRLWSAFDSVG 520
XP_003721311 386 DPlvGLLHKEEVLLAGCIR------VDCATYLTAKRRIFQRRLECMmqpKE-FRKTDAqqachiDVNKASKMWQAFDKVG 458
Q0C7V8       309 DPdrDLLSPAELSLAATLR------LSCATYLCSKRRIFEARVKALnvnKE-FRKTDAqqackiDVNKASKLWTAYDRVG 381 Aspergillus ter...
XP_014074256 305 DPdrDLLHEAELNLAGTLR------LNCATYLTSKRRIFQARIEALrigKE-FRKTDAqqackiDVNKASKLWQSYDRVG 377
EKG19654     295 DPdrGELHPSELNVASTLR------LTCATYLYNKRRIFQARVRALirgED-FNKTKAqqackiDVNKASKLWAAYEKIG 367
XP_003833871 305 DPdrHRLHEAELVLASTLR------LTCATYLCSKRRLFIGRVEALrkgKE-FRKTDAqqackiDVNKASKLWSSYEKVG 377
XP_002836063 185 DPhlHLLHPSEVGLASTLR------LSCASYLTSKRRIFQDKVERAkqhKE-FRKTDAqkachiDVNKASKLWAAYEKVG 257
EWY89449     330 DPhrHLLHPDELTLASNLR------LDCATYLASKRRIFISRLSCYkrvKD-FRKTDAqqackiDVNKASKLWTAFDRAG 402 Fusarium oxyspo...
6V8O_I       165 LINY 168 Saccharomyces cerevisiae S288C
EME47931     406 WFDE 409
XP_003855093 521 WFDE 524
XP_003721311 459 WLDS 462
Q0C7V8       382 WFRP 385 Aspergillus terreus NIH2624
XP_014074256 378 WFNP 381
EKG19654     368 WFKP 371
XP_003833871 378 WFNP 381
XP_002836063 258 WLDP 261
EWY89449     403 WFHK 406 Fusarium oxysporum NRRL 32931
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