Conserved Protein Domain Family
DUF543

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pfam04418: DUF543 
Domain of unknown function (DUF543)
This family of short eukaryotic proteins has no known function. Most of the members of this family are only 80 amino acid residues long. However the Arabidopsis homolog is over 300 residues long. The presumed domain contains a conserved amino terminal cysteine and a conserved motif GXGXGXG in the carboxy terminal half that may be functionally important.
Statistics
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PSSM-Id: 398222
Aligned: 43 rows
Threshold Bit Score: 75.4052
Threshold Setting Gi: 298710499
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q96VH5         5 AQTqqp--------------------------akSTPSKdsnkngssvsTILDTKWDIVLSNMLVKTAMGFGVGVFTSVL 58  Saccharomyces c...
EDW32477       5 QKSlea-------------------------kklEAARVa---------ESSSKTNDKCITDFLMKGASGLIIGTVFTVF 50  Drosophila pers...
Q386U0         2 SEQrvs-------------------------qpkTPVSN-------------EEKWDHSLENFFRKTTLGLAYSILPAFL 43  Trypanosoma brucei
Q4DI40         2 STEpvl-------------------------qpqTSISN-------------EEKWDHCMENFIRKTTLGFACGVLPALL 43  Trypanosoma cruzi
CBJ25563       1 ---------------------------maenkpkNVPSE----------FKISEKWDVCLERTVINFGAGVVAAGLAGVV 43  Ectocarpus sili...
Q6AVR1         2 AESpenaapaaapapapaptpapppppsspptksGIPPR----------YDLDAKWDACLDISIRRVAYSTLGGTFAGLL 71  Japanese rice
XP_006339367   2 AEEnkq-------------------------eqsVVPSE----------YNLDAKWDACLDLGLRRFTYFSLIGGFAGLL 46  potato
XP_006577806   1 ----------------------------maekkeMIPKQ----------YDIDAKWDACIDLTVRRFVYSASAGAFGGLL 42  soybean
Q8GWC7         1 ----------------------------maekkdSVPPE----------YDVNAKWDACLDLTVRRFVYSSLGGAFAGLL 42  thale cress
THU46685      29 AEEqqq-------------------------kpqGIPPR----------YDLNAKWDACLDITMRRLTYSSLAGAFTALL 73  Balbis banana
Q96VH5        59 FFK---RRAFPVWLGIGFGVGRGYAEGDAIFR 87  Saccharomyces cerevisiae S288C
EDW32477      51 FTR---PRTYPIWLGLGVGMGLAYDCCQKRLa 79  Drosophila persimilis
Q386U0        44 LARsaaARGAILMFATGIGSGIAYGEARYLFD 75  Trypanosoma brucei
Q4DI40        44 ISRslvARASIVLFCAGVGSGIAYGEARYLFD 75  Trypanosoma cruzi
CBJ25563      44 LTRspgMRRAVMGFGAGCGVGSSWVICSQDFa 75  Ectocarpus siliculosus
Q6AVR1        72 LFRsptTRWASVALGAGVGIGAAYTECSYLFN 103 Japanese rice
XP_006339367  47 LFRspvTRWASTAFGAGAGLGSAYTECSQKFg 78  potato
XP_006577806  43 FFRspvTRWASIAFGAGVGIGSAYAECSRLFD 74  soybean
Q8GWC7        43 FFRspvTRWASIALGAGIGIGSAYSDCSRAFD 74  thale cress
THU46685      74 FFRspvTQWASVAFAAGVGIGSAYTDCSYIFD 105 Balbis banana
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