6S10,1DVO


Conserved Protein Domain Family
ProQ

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pfam04352: ProQ (This model is not part of the current CDD release)
ProQ/FINO family
This family includes ProQ, which is required for full activation of the osmoprotectant transporter, ProP, in Escherichia coli. This family includes several bacterial fertility inhibition (FINO) proteins. The conjugative transfer of F-like plasmids is repressed by FinO, an RNA binding protein. FinO interacts with the F-plasmid encoded traJ mRNA and its antisense RNA, FinP, stabilising FinP against endonucleolytic degradation and facilitating sense-antisense RNA recognition. ProQ operates as an RNA-chaperone, binding RNA and bringing about both RNA strand-exchange and RNA duplexing. This suggests that in fact it does not regulate ProP transcription but rather regulates ProP translation through activity as an RNA-binding protein.
Statistics
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PSSM-Id: 516191
Aligned: 44 rows
Threshold Bit Score: 69.9442
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6S10_A         15 QVIDWLIENFPnAFFKKGnqVKPLKIGIFDDLIdfyERLDTPPFSKKSLREALSYYSASPAYLSCQKPDTARVDIYGNEV 94  Legionella pne...
nioo:CFU_0163  21 VLLKELQEKFA-VFRD----YQPLAIGIDKQLI-----ALTPELNRKTLRIALGMHTNSLRYLKGMEKATHRFDLEGNST 90 
CAL63045       15 ILLKELQEKFP-VFGD----FLPLAIGIDKQLI-----ALTPDVSRKSLRTALGIHTNSLRYLKGMEKATIRFNLDGSHA 84 
Q9I0Q4         43 EAIWRLQRHFPlAFPKSPaaKVPLKQGILQDAQ---QHLELLGITAEQLKQAIATWCQGSRYWSCMVEDAPRLDLQGQVA 119 Pseudomonas ae...
WP_013819765   46 LIIGQLQKNFPlAFPKNPapKVPLKIGIHKDIF---ERSEQLGIDKRDLRAAIKTWCWGKRYWECLLEDAVRVDLDGHAA 122 Methylomonas m...
WP_012400486   81 HTIGRLQKRYPlAFPKNPapKVALKIGILDDLL---AQAGELKLSEQEVRDAVSTWCRGSRYWASLTEGASRVDLTGAET 157 Paraburkholder...
Q1GY08         51 LTIGRLQRLFPkAFPKNPapKLPLKIGIHKELL---AKASEIKLEEAAITEAVKTWCRGTRYWASIVEGAPRIDLEGNPA 127 Methylobacillu...
3_pfamImport    6 LTIGKLQRRFPaAFPKSPapKVPLKIGIFKDLV---GHAAELGLDEAQLRDAIKEWCRGSRYWACLVDGAARVDLTGAEA 82 
Q63LB6         57 LTIAKLQKRFPqAFPRNPapKVPLKVGILEDLV---GQASALGLSEAELRDAMRTWCQGNRYWTCLVEGAVRIDLAGGEA 133 Burkholderia p...
Q0K2K7         56 HSIARLQKHFPkAFPKNPapKVPLKVGTFEDLA---QHAGKLALTEAELREAIRTWCSGARYWSCMVEGAKRLDLEGNEA 132 Cupriavidus ne...
6S10_A         95 DVVTPEQAKYAYQ-----RYQERYGNKKSQ 119 Legionella pneumophila
nioo:CFU_0163  91 DEVTEVHRTHATEtl--rERFKKNAEQRKA 118
CAL63045       85 DEVTDVHRTHATTtl--kERFKKNAEQRKA 112
Q9I0Q4        120 GKVTAEQAVYARRqa--sRRQREQMREKRA 147 Pseudomonas aeruginosa
WP_013819765  123 GQVTKVDADQAIKlkegrRRTQKTAAEPhe 152 Methylomonas methanica
WP_012400486  158 GKVTASESAFARRrs--gGRTKPVTTKAGE 185 Paraburkholderia phymatum
Q1GY08        128 GEVTARDAAQARAle--aRRKQPRKPKAET 155 Methylobacillus flagellatus KT
3_pfamImport   83 GTVTAQQAAGAVRld--aARRSRSAGK--- 107
Q63LB6        134 GRVSAADAKRARMlk--gRRPAKPRAQPSR 161 Burkholderia pseudomallei
Q0K2K7        133 GVVSLADAKRAQQlk--aRRGAGTRPRKAK 160 Cupriavidus necator H16
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