2G0J


Conserved Protein Domain Family
Peptidase_Prp

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pfam04327: Peptidase_Prp 
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Cysteine protease Prp
This is a family of cysteine protease that are found to cleave the N-terminus extension of ribosomal subunit L27 in eubacteria. Proteins in this family are distinguished by a pair of invariant histidine and cysteine residues with conserved spacing that form the classic catalytic dyad of a cysteine protease.
Statistics
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PSSM-Id: 398155
Aligned: 287 rows
Threshold Bit Score: 57.9604
Threshold Setting Gi: 530895121
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2G0J_D               35 MIQATFIRR-KGILESVELTGHAGsgeYGFDIVCAAVSTLSMNLVNALEVLADCTVslqmdefdgg-ymkidlsyiTNKS 112 Streptoc...
CDE48599              1 MTRAVLFEDaAGRITGVSVKGHSGyaeEGSDIVCAGISTLLITIDQALCSLVGLSPiehggedgf--aevllppgiTDKQ 78  Faecalib...
Q03RQ5                1 MIHATFHHG-TNRIDSFQITGHADsgeYGQDIVCAAVSVLAITTVNGLQRIAQIPVqvdnhdqeggflevhlppklEATA 79  Lactobac...
WP_003668417          1 MIRAQFTLDsNQRITSFKMTGHADsgpYGQDIVCAAVSALSISTVNGLEQVVHTKPhlkqdndng-----gflevtglDL 75  Lactobac...
Q03G00                1 MIQTCFYRD-KDRISGFKITGHADsgeYGRDIVCAAVSVLSINTVNSIEQITKIMPlvdsddenggflsvnvpessDVDS 79  Pediococ...
Q1WTI1                1 MIRARFLYR-DKLISGFEMRGHADsgeYGQDIVCSAVSVLAINTVNSLEKLANADLnivsddeng--gllevhvseNFLS 77  Lactobac...
Ziola:PECL_1068       1 MIQAQVFEN-QKRITGFKITGHADyseYGSDIVCSAISVLAINTVNSAEKLTGVKLivdsdnanggylnvtvprtiDSKQ 79  Pediococ...
OTooleUCC:LRC_08210   1 MINACLFRK-DSRLSGFELSGHADsgeYGQDIVCAAVSVLSINTINSLEKLAGVVLekelddlng--gfmkvsvddSDLD 77  Lactobac...
jgi:Btus_0679         1 MIRVKVQRDrRGRIRRLKVSGHAGwseAGQDIVCAAVSALTLNLVNSCQSLLGVSLpatarngfl---dldvppdlPDEI 77  Kyrpidia...
jgi:Aaci_1816         1 MIELDVLLR-GEGLEGFRVRGHAGyaeAGRDIVCAAVSVLVYNFINSAERFADTPLevrdrgd-------ellcrfPPAL 72  Alicyclo...
2G0J_D              113 DEKVQLLFEAFLLGITNLAENSPEFVT 139 Streptococcus mutans
CDE48599             79 MEQAQLLFGALRIGFSAIAEQYPAYFR 105 Faecalibacterium sp. CAG:74
Q03RQ5               80 ELKGQTLLQSFADGLRDVANNYADFVE 106 Lactobacillus brevis ATCC 367
WP_003668417         76 GHDSQILLKTLLNGLCDIQESYPQNIE 102 Lactobacillus reuteri
Q03G00               80 NRMAQVLLEALEIGLRDISKSYKEYLv 106 Pediococcus pentosaceus ATCC 25745
Q1WTI1               78 NESVKLLLASLKLGLEDVEKMYGDFIK 104 Lactobacillus salivarius UCC118
Ziola:PECL_1068      80 DEQLQVLLKSLRLGLVDVSQSYGKYIK 106 Pediococcus claussenii ATCC BAA-344
OTooleUCC:LRC_08210  78 DPKVQLLLESLELGLRDIEISYHEYIH 104 Lactobacillus ruminis ATCC 27782
jgi:Btus_0679        78 SDQVQLLLESCVFGLWQTAVQYRHHVT 104 Kyrpidia tusciae DSM 2912
jgi:Aaci_1816        73 NSRAKLLFDSMLFGIEQVAEQYPDHVR 99  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
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