Conserved Protein Domain Family
AlbA_2

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pfam04326: AlbA_2 
Putative DNA-binding domain
This family belongs to the AlbA clan of DNA-binding domains.
Statistics
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PSSM-Id: 398154
Aligned: 76 rows
Threshold Bit Score: 43.0475
Threshold Setting Gi: 151358847
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q07XI6       223 EGQHVEFKACYQSSNTKrqydkknlsqqRITSVVAFLNS------NdGNLFIGVD--D-------DMT---IHGIedelm 284 Shewanella frig...
WP_011864945  19 EDHFNDVKSKRINPGK------------LQETFVAFANSd-----G-GDLYIGIE--Dk------SETgerVIGF----- 67  Shewanella loihica
Q5E547        19 EDHFFDRKAFGLKGEK------------VQKIAVAFANAd-----G-GEILVGIA--D-------DKDeviPEKRw---- 67  Aliivibrio fisc...
Q89Z47        13 EGQTFDCKSILIEPKH------------LATIIVAMANA------DgGMIAVGIS--Dk------TRR---IEGVn---- 59  Bacteroides the...
Q8RF86        20 ENSFIEYKKSINFKDK------------ILKTACAFANNymn--neiNFLFIGVEevDnkengekAIPkrpISGIk---- 81  Fusobacterium n...
Q8RID9        21 ETTWIEVKENKIEVDK------------LGETISAIANScllddkDyGYIIIGIK--Dk------TWE---ILGTsnr-- 75  Fusobacterium n...
WP_011940469  18 ENEVIEFKNVGDSYSTSd----------IGKYFSALANEanlrdvEkAWLVFGVN--Nk------SRS---IVGSd---- 72  Geobacter urani...
Q6W1B7        19 ESAWLEFKVNNKDPRE------------IGEYVSALANSamlagrDrAFLVFGVE--Dr------TKR---RVGTel--- 72  Sinorhizobium f...
WP_012468720  23 ETEWVEFKHNNDNPDE------------IGEYLSALANAaaltgkVhAYLLWGVN--Ne------THE---IIGTcf--- 76  Geobacter lovleyi
WP_008200574  19 ESKTLDFKLEVSSSSK------------IARTLAAMANTe-----G-GFLIIGIS--D-------QKK---VVGI----- 63  Algoriphagus ma...
Q07XI6       285 qyhsdsedkfvmqltslfRDSIYTRTTDNLELKALAKPKELI-TISLVSINGH--------TVAWVQVKQSREHL----- 350 Shewanella frig...
WP_011864945  68 -------------------GEQEDANALISTLLEETNPAVENvVIEFLEVEGKg-------LILHFGIPKSPKVH----- 116 Shewanella loihica
Q5E547        68 -----------------qGQESTEAYNSVIQALSELVPSVDF-RFDFLTRVNEsr-----nYVLRVKINKGLSVH----- 119 Aliivibrio fisc...
Q89Z47        60 ------------------QDKEHLNDILRT-PLDFCVPSVSV-TTDYVPCTDAegr---dnRVLLMHIPASPRLH----- 111 Bacteroides the...
Q8RF86        82 ------------------ESMIEGIENDLKSLLSNITPKINY-HIIQDKIDNK--------YYLVVAIEQGSNGPyqtne 134 Fusobacterium n...
Q8RID9        76 ----------------lsEYHLKGGQEVKLYISTMLLPRINFeFIDDYIIDNK--------KISIIKIPSATHTP----- 126 Fusobacterium n...
WP_011940469  73 -----------------yRQDNERLQSLKMQISAETEPSITFrEIHELQSDKG--------RVILFEIPAAPLGM----- 122 Geobacter urani...
Q6W1B7        73 ----------------rlQQQKQGNEDFTNWLTRMVEPRVLI-EVLDFVCDDL--------AYSVVAIEPSYERP----- 122 Sinorhizobium f...
WP_012468720  77 ----------------dpAKTKVGNEELESWLLRLLSPKINF-RFYPIQAAGK--------PVVLLEIGAAFRHP----- 126 Geobacter lovleyi
WP_008200574  64 -------------------DVHEERFMIERANQEYCQPKVKLkMIDFLWIDEDskeneeetWILIVEIQKSNEGV----- 119 Algoriphagus ma...
Q07XI6       351 --FFYREsksnYQFFIRTGRNKEK-IK 374 Shewanella frigidimarina NCIMB 400
WP_011864945 117 ---YTAS----GDCYIRINAAKRK-IK 135 Shewanella loihica
Q5E547       120 ---ETAK----KKIFLRQGAQSLPvTA 139 Aliivibrio fischeri ES114
Q89Z47       112 ---ANQA----DEVFWRVGDKSRK-LT 130 Bacteroides thetaiotaomicron
Q8RF86       135 kaEKDKEiklkQGRYIRISRDTKL-PN 160 Fusobacterium nucleatum subsp. nucleatum
Q8RID9       127 ---ISYK----NEIYLRIGSNNKLaKE 146 Fusobacterium nucleatum subsp. nucleatum
WP_011940469 123 --PIAWK----GHYYARAGESLTH-LG 142 Geobacter uraniireducens
Q6W1B7       123 ---VKFA----GTEFVRIGENKKKlAE 142 Sinorhizobium fredii NGR234
WP_012468720 127 ---VQFK----NTEFIRVGSYKKKlKD 146 Geobacter lovleyi
WP_008200574 120 --ILYKGntgeLRHYIRIEDQTKLfAG 144 Algoriphagus machipongonensis
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