1S7O,1XSV


Conserved Protein Domain Family
UPF0122

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pfam04297: UPF0122 (This model is not part of the current CDD release)
Putative helix-turn-helix protein, YlxM / p13 like
Members of this family are predicted to contain a helix-turn-helix motif, for example residues 37-55 in Mycoplasma mycoides p13. Genes encoding family members are often part of operons that encode components of the SRP pathway, and this protein may regulate the expression of an operon related to the SRP pathway.
Statistics
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PSSM-Id: 516158
Aligned: 11 rows
Threshold Bit Score: 104.388
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1S7O_A   6 IEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIADEFGVSRQAVYDNIKRTEKILETYEMKLHMYSDYVVRSEI 85  Streptococcus pyogene...
Q8DPH0   3 IEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEEFGVSRQAVYDNIKRTEKILEDYEMKLHMYSDYIVRSQI 82  Streptococcus pneumon...
Q9CFN3   3 IEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTEKVLESYEEKLHLFSNYVVRNQL 82  Lactococcus lactis su...
Q2FZ47   6 lVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREI 85  Staphylococcus aureus...
P37104   3 LEKTTRMNYLFDFYQSLLTSKQKSYMSLYYLDDFSLGEIAEEYEVSRQAVYDNIKRTEAMLEQYEEKLLLLKKFQERKEM 82  Bacillus subtilis sub...
Q9KA09   2 LDKTLRMNYLFDFYQSLLTEKQRKYMSLYYLDDFSLGEIAEEFDVSRQAVYDNIKRTEAMLEEYEEKLSLLAKFEKRSEI 81  Halalkalibacterium ha...
Q97I99   1 MEERIYLSMLLSTYGSLLTEKQVNVMRLYYDDDLSMPEIAELNNTTRQAIHDLIKRCHKMLLNYENKLKLVEKYKRNEDI 80  Clostridium acetobuty...
P75363   6 LNQRLKQQQLFDIYGELLTKRQACYFNEYINLDLSMQEIADKYQVKKSSIHQHIKTCNLIFNRFEAKLQLFKKQQLRLKL 85  Mycoplasmoides pneumo...
Q6MTB8   9 LEKTLELSELFKIYKELLTDKQKQYFELYIDEDLSLSEIADEFNISKTAVYDSISKTSKLLFSLEKKLHLKQKQDLLISL 88  Mycoplasma mycoides s...
Q9PR02   4 KNKRWYLIALYDIYQGLLTTKQCEYFNLHYFKDLSFSEIAELKEISKSAISDCLNKVCDQLLKYEQALLIYEKNKKRNDL 83  Ureaplasma parvum ser...
1XSV_A   9 LVKTLRXNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREI 88  Staphylococcus aureus
1S7O_A  86 FDDMIAHYPHdeylqEKI 103 Streptococcus pyogenes serotype M3
Q8DPH0  83 FDQILERYPKdnflqEQI 100 Streptococcus pneumoniae R6
Q9CFN3  83 LEELMKKYSTdqyliTKL 100 Lactococcus lactis subsp. lactis Il1403
Q2FZ47  86 YDEMKQHLSNpeqiqryi 103 Staphylococcus aureus subsp. aureus NCTC 8325
P37104  83 FNKLKELASGskeeeEIT 100 Bacillus subtilis subsp. subtilis str. 168
Q9KA09  82 LQQLKEAVDKqatseELM 99  Halalkalibacterium halodurans C-125
Q97I99  81 KKDIKDKLYIlkdkiQDK 98  Clostridium acetobutylicum ATCC 824
P75363  86 YEKITDPQLRe----QLI 99  Mycoplasmoides pneumoniae M129
Q6MTB8  89 INKIETNQIDqkqfiKSL 106 Mycoplasma mycoides subsp. mycoides SC
Q9PR02  84 YTLINDSELV-----KKL 96  Ureaplasma parvum serovar 3 str. ATCC 700970
1XSV_A  89 YDEXKQHLSNpeqiqRYI 106 Staphylococcus aureus
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