2X34,5W2D


Conserved Protein Domain Family
YceI

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pfam04264: YceI 
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YceI-like domain
E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.
Statistics
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PSSM-Id: 398103
Aligned: 797 rows
Threshold Bit Score: 30.2551
Threshold Setting Gi: 506310290
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2X34_B              7 LDA--TASFLnfvsskkthvlethrfdvlsggist-----ageaqlvidlnsvntgidvrngrxRDYLFETATYSVAtvt 79  Saccharoph...
Q1ILZ6             31 FDP--ATTKVdftladvlhtvhgtfklksgsihfdpa-tgaaggqlvvdvpsgqsgndtrdhkmHKEILQSDRFPDA--- 104 Candidatus...
Q029E4             34 IDP--AQTKVeftladtlhtvhgtfqlasgtlrfdpa-tgaasgevvvdarsgdsgskardkrmHANILESAKYPQI--- 107 Candidatus...
tigr:ACP_0881      55 IDP--AKSQVqfslggfhevngffkvssgdirfdrk--tgamsgliaveaasgnsgnsardkkmKGDELHASKFPAI--- 127 Acidobacte...
WP_014787715       26 INPdtSEVKMqlktnheivngtfhlqsgtinfdrta---ttisgnvdvaaitgktgndsrdkkmKKDILKTDKYTEV--- 99  Terriglobu...
jgi:AciPR4_2877    26 VTPdaSEVRIklntthevvngtfhvqsgsisfdrai---tqisglvtvvagsgktgndsrdkkmNKDILKVDQFTTV--- 99  Terriglobu...
Q2IEA9             38 tfavgpASTLayrlvhkfhevnglsravegrarllp--dgtvqvmvrapldsfhsgnsnrdahmL-EVTGAARQPYV--- 111 Anaeromyxo...
MPITM:COCOR_07968  49 VKK--EASSLtyklihkmhtvsgkaapsegkavlkp--dgtlqvavraqvkdfdsqnsnrdthmL-EVTEAAKYPLV--- 120 Corallococ...
Q1CVT4             29 VKK--DASSLtyklkhklhevvgkaqpsdgkarllp--dgtlqvavranvkdfdsgnanrdahmL-ETTDAARFPII--- 100 Myxococcus...
Q2S0X2             35 IDS--TASLVhytgtaplhswrgtsrsvqgkfvlrprrpdssraviripvasfdsgnstrdsgmR-DVTEADAYPFV--- 108 Salinibact...
2X34_B             80 vPVdlAAVAgLAvged--------xlvdVSATLDLHGVPGvIDTQLNVQrL------------SAtrIXvqnqSPLLIKA 139 Saccharoph...
Q1ILZ6            105 -TF--TPSK-------------------VIGHLAMSGASQ-VQVQGIFRiHgadhdltltvpaQIngTQlqmqTQFEIPF 161 Candidatus...
Q029E4            108 -AF--RPDR-LEgklape----gksqvqLHGMFSIHGAEHeITVPAVVEsTggqy---------------nvaATFAVPY 164 Candidatus...
tigr:ACP_0881     128 -TFapTQFTgILkdage-------ssieVHGMFTLIGKPHsIVVPMTV---------------TIngDQcvakGSFVVPY 184 Acidobacte...
WP_014787715      100 -TF--Ap---ASytgtinp--tgdstieVSGAFTLLGAAHtITIPMQIH--------------IDh-ENgtakSRFVIPY 156 Terriglobu...
jgi:AciPR4_2877   100 -SF--Ap---KAyrgmiva--sgdstiqVSGVFTLLGTGHdITVPMQIR--------------IVg-STatakAQFAVPY 156 Terriglobu...
Q2IEA9            112 -VFkgVG-H-LEppdryp----adlriaLRGELTLKS-PRpVEVAAAVH--------------FDapDRarveATFPVSL 169 Anaeromyxo...
MPITM:COCOR_07968 121 -EVkaVGTG-VKppatfp----gsvpvtLKGKLTFHGVTKdVEIPMTVK--------------FDseKQvtadGSFKISL 180 Corallococ...
Q1CVT4            101 -DFkgVATG-VKpptsfp----akvpvkVKGQLTFHGVKKtVEIPMTVL--------------FKseKQavaeGSFDISL 160 Myxococcus...
Q2S0X2            109 -TF--RGTD-FSpltwgrgasgyrggwaVSGELTFHGRTHpLRDTVSVE--------------VAgdTVra-rAEFDVSL 169 Salinibact...
2X34_B            140 ADYSleagietlrnlaslNvISTTVPVDFV 169 Saccharophagus degradans 2-40
Q1ILZ6            162 VKWGmkdp------stfiLrVNKEVQMSIS 185 Candidatus Koribacter versatilis Ellin345
Q029E4            165 VKWGmknp------snliLrVGDTVEISLH 188 Candidatus Solibacter usitatus Ellin6076
tigr:ACP_0881     185 VEWGmkdpt-----mmfmKeAKD---VKID 206 Acidobacterium capsulatum ATCC 51196
WP_014787715      157 VQWGlknp------sflmWkAEDNVAIDLN 180 Terriglobus roseus
jgi:AciPR4_2877   157 VQWGlrnp------sflfWkAENDVAVDLS 180 Terriglobus saanensis SP1PR4
Q2IEA9            170 DAHQverp------ellfVkVDDRVDVDAR 193 Anaeromyxobacter dehalogenans 2CP-C
MPITM:COCOR_07968 181 EGYNierp------tlllVkVDDELVLEPH 204 Corallococcus coralloides DSM 2259
Q1CVT4            161 DAYNvnrp------sllmVkVDDVLVLEPK 184 Myxococcus xanthus DK 1622
Q2S0X2            170 TRFDverp------gfmgFtVGDTIRIDAQ 193 Salinibacter ruber DSM 13855
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