Conserved Protein Domain Family
RseC_MucC

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pfam04246: RseC_MucC (This model is not part of the current CDD release)
Positive regulator of sigma(E), RseC/MucC
This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions). In Pseudomonas aeruginosa, de-repression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonisation in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains an ApbE domain pfam02424, which is itself involved in thiamine biosynthesis.
Statistics
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PSSM-Id: 516129
Aligned: 148 rows
Threshold Bit Score: 48.7532
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_052199358   8 VVAIEGDIALLHTEGQSACG--S-CQANS-----TCgtgl---lakLfptRARQPLRLPI------DhLarrplpGQRVV 70  endosymbiont of...
WP_013757882   7 VLNFEKNTVWVTPLISDTCI--N-CNRQ------SCakr-----gtPfqaTNPRKLELSC---------------GDIVQ 57  Treponema brenn...
WP_014150063   8 VAKIEHNQVWVESKPKQGCG--G-CLQKS-----SCstsv---ldkF-----IKKRSIAVdcdielK-T------GDEVV 64  Methylotuvimicr...
WP_013819700   8 VTRIADGEVWIKSLQSGACG--G-CAQHS-----SCgtatlskwlpKrefAVESDRPLKV---------------GDQVR 64  Methylomonas me...
WP_012447727  14 VIERKDNYVTVEIERHSACK--N-CG--------AC----------DfgmSGNKTSELELentvnaE-V------GDEVV 65  Natranaerobius ...
WP_015906423   9 katePGGYAQVMTERKNVCG--E-CYHNKiv-cySC--------------LLNPKVIGRVanpvgaR-V------GDTVK 63  Desulforapulum ...
WP_004072347  14 ikkeKNGFAQVVMDRKSACS--G-CDTRKvdkcrSC--------------LTGTKIKARVhnskgaE-E------GDIVT 69  Desulfobacter p...
WP_021920748   8 ksvlDNGMAQVAVQRETACGaaHsCADCA-----GCek-----------mMTRTENVVVAyndvnaH-P------GDVVK 64  Evtepia gabavorous
WP_022289568   8 erilDADYAEVSVPRKSACG--HdCEECA-----GCg-------------VTGAAVRAKAsnpigaR-P------GQKVV 60  environmental s...
CDE49829       7 ITAVSGDTLEVTFCRPGDCE--K-CH--------AC--------------IGGEKKHVLL--------VkgeghvGDAAV 53 
WP_052199358  71 LGIDEDYLQRNTLLLYAVPLLGLLGGAILGDLSSagdtagGGSELAAIFGGLFGLTAAIFWVRWRSHC--ATARLAHSVR 148 endosymbiont of...
WP_013757882  58 IGSSPKAAALQGIFSLLVPVAAATAGYFLADPAAqll-qkTVTEGMRAAGVLGLLLLSTGIVFLLTRG----RLNLTKPE 132 Treponema brenn...
WP_014150063  65 IGISEGILIKASLLLYMLPLVVMVLSGAVAEAFLps--gyEHGDLVIAGTAISALLLSLWAISKLQQS--FFYTFFSRPV 140 Methylotuvimicr...
WP_013819700  65 VGLDDSHVLLSSIVLYLLPILVMLLGVGLANTFLp----pAFCEAWLPELSLSLLLATFWGIHKLQNV--LLLYFCFRPQ 138 Methylomonas me...
WP_012447727  66 VDMEGKDIVLASFLIYLFPLFSLVLGLFLGNMVAae--inGDENLIGLAFGILFMGFSYTGLKMYDNKvkTSQPQKFKPK 143 Natranaerobius ...
WP_015906423  64 IHISAQKLYTAAGMFYLLPVFTLLLGILLGIYVSet--lgVSETTTAIGCSFAGLAVGILFVTVLGRT--TKISKMLEPV 139 Desulforapulum ...
WP_004072347  70 VSMSRAKIMKGAAAFYLIPVIFLIAGAFVGSSLGdf--ltIDNSLSAIIGGFVSLVFGFYIVRKISER--MNSDQGLVPE 145 Desulfobacter p...
WP_021920748  65 VQSENGNFFKTAAIVYLLPLVLALVFYGVASALS------LGGEGLHALCAGIGFVLGILVAVAWDRH--MKKVSGLRFH 136 Evtepia gabavorous
WP_022289568  61 VQSDTQKMLRIVALVYLIPVVLFLAGYVIPTML-------SASTGLSIFIAVLGFVAGILIAVRYDRF--LRRQGGLSFR 131 environmental s...
CDE49829      54 VSLPEQTVVKASALAYLLPLAGLFIGMLLGALVAp-----QSETAGSAIGGVIGLAAALIGLTATEKK--RSQSGEYAPK 126
WP_052199358 149 ILR 151 endosymbiont of unidentified scaly snail isolate Monju
WP_013757882 133 IIS 135 Treponema brennaborense
WP_014150063 141 VIR 143 Methylotuvimicrobium alcaliphilum
WP_013819700 139 IVG 141 Methylomonas methanica
WP_012447727 144 ILK 146 Natranaerobius thermophilus
WP_015906423 140 ISS 142 Desulforapulum autotrophicum
WP_004072347 146 ITE 148 Desulfobacter postgatei
WP_021920748 137 IVE 139 Evtepia gabavorous
WP_022289568 132 IVR 134 environmental samples
CDE49829     127 LLR 129
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