5ICA


Conserved Protein Domain Family
Utp21

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pfam04192: Utp21 (This model is not part of the current CDD release)
Utp21 specific WD40 associated putative domain
Utp21 is a subunit of U3 snoRNP, which is essential for synthesis of 18S rRNA.
Statistics
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PSSM-Id: 516095
Aligned: 108 rows
Threshold Bit Score: 160.78
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ICA_C         29 DQLSADMMTLSLVPRSRWQTLLHIDIIKARNKPKEPPKAPEKAPFFLPPVGqngisSLIPQEDAKAKKEKAAANGA---S 105  Thermochaetoi...
Q3TAQ9        693 EQLSEQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPQSAPFFIPTVP-----GLVPRFAVP------EPSSDpqqS 761  house mouse
XP_001513138  691 EQLDEQLVTLSLLSESRWKNLLNLDVIKKRNKPKEPPKVPKSAPFFIPTVP-----GLIPKYLSS-------EPSDvqeS 758 
XP_001369891  693 EQLNEQLLTLSLLPESRWKNLLNLTVIKKKNKPKEPPKVPKSAPFFIPTVP-----GLVPKYLSS------EQDTGsqqS 761 
XP_003223040  689 DQLGEALVTLSTLPESRWKNLLNLDIIKQKNKPKEPPKVPKSAPFFIPTIP-----GLVPKYASV------EHENDgqqS 757 
NP_001120392  691 EQLGEKLVTLSLLPESRWKNLLNLDIIKQRNKPKEPPKVPKSAPFFIPTLP-----GLVPRFASD-------AQGDtsqS 758 
1_pfamImport    1 AQLDEQLITLSLLPESRWKNLLNLDIIKKRNKPKEPPKVPKAAPFFIPTIP-----GLVPQFGQV-------ETPSeeqS 68  
XP_015192182  688 EQLADQLVTLSLLPDSRWKNLLKLDIIKKRNKPKEPPKVPKSAPFFLPTVP-----GLLPQFGAA------DSSSTegqS 756 
XP_004342662  796 DQLSAELITMSALPKARWFNLTNLDLIRERNKPKEAPKAPVAAPFFLPTIA-----GTEDKFAIRLESDGDENNRStsqS 870 
XP_064412726  612 EQLGEQLVTLSLLPESRWKNLINLDVIKKRNKPKEPPKVPKSAPFFIPTVP-----GLVPQFAVP------GEQANteqS 680  coelacanth
5ICA_C        106 RITKLdltrQEQTFTSKLLVGGAKGDYTDFIEHLKALPPAAADLELRSLsi---------gNGDEATNELLHFIRALTSR 176  Thermochaetoi...
Q3TAQ9        762 KVVNLgilaQKSNFYLKLEEGLLNNQYEAALNLLKELGPSGIETELRNLs----------pDDGGSVEVMRSFLSMIGMM 831  house mouse
XP_001513138  759 KIVNLgilaQKSDFYLKLEESLTSTKYEPPLNLLKEMGPSRIETELRSLs----------pECGGSVEAMQSFLRMIGTV 828 
XP_001369891  762 KVINLgilaQKSDFCLKLEEGLSTNKYESPLNVLKELGPSAIEIELRSLs----------pECGGSVKLMQSFLKMIGAM 831 
XP_003223040  758 KIVDLgvlaQKSEFHIQLEETLVNNNYNSPISILKGLGPSNIETELRGLa----------pEGGGSIEVMQSFLRMIEAM 827 
NP_001120392  759 KIVNLgvleQKSAFFVQLEEALTRQNYSVPLKTIKEMGPSSVDTELRNLa----------pENGGSVEVMQSFLKMIQSM 828 
1_pfamImport   69 KVVNLgmlaQKSSFYLQLEGALETNLYEGAVQFLKELGPSAIDTELRSLa----------pDMGGDIRVMQSFLKMIGTM 138 
XP_015192182  757 KIVNFgvlaQKSDFYHQLEDALVSNDYTGAVSLLKGMGPSSIETELRGLa----------pDVGGSLDVMQSFLKMIISI 826 
XP_004342662  871 RILNFadmdVLSPFARLLLNCGETDDFEPALALLIEFPPVAVDLEIRGLysgsdaivsglsNRAGDVTLLQQFGKMLVHG 950 
XP_064412726  681 KVLNLgvlaQKSNFYMQLEDALLHEDYNSPVKLLKEMGPSSIDTELRGLa----------pEGGGSLEVMSSFLRMIGSM 750  coelacanth
5ICA_C        177 LVARRDYELTQAWMTVFLRLHFDLIMENEELLQALGEWREHQARERDRLSELVGYCGGVVSFLR 240  Thermochaetoides thermophila ...
Q3TAQ9        832 LDRKRDFELAQAYLALFLKLHLRTLPSEPALLEELVKLSSQVEKDWTHLQSLFNQSMCVLNYIK 895  house mouse
XP_001513138  829 LHSKQNFELAQAYLALFLKLHLKMLPSEPVLLEEVSKLSTQLEETWLHLQRLFNQSLCVLSYTK 892 
XP_001369891  832 LTTKRDFELAQAYLGLFLKLHLKILPSEAVLLEEMTALSSQLEETWIHLQSLFNQSLCVLNFIK 895 
XP_003223040  828 LNTKCDFELAQAYLALFLKLHFKILSSEPTLLAEISRLSPQLEETRIHLQTLFNQSLCILNYIK 891 
NP_001120392  829 LDTKKDFEVAQAYLALFLKLHLKFISSEPILLEEINAVLPSLEETWLNLQTLFNQSLCVLNYMK 892 
1_pfamImport  139 LHLKKDFDLAQAYLALFLKLHLQLIAEQPILMEEAETILEQLEETWISMQSLLNQSMCLLSYIK 202 
XP_015192182  827 LDSKRDFDLAQAYLALFLKLHLRLISEEPVLMDLAREVSTRIEETWTNMQMLFNKSLCLLAYMK 890 
XP_004342662  951 LRKRTHFELLQAFLNVFLKVHEEAFANQELLRPLARELQSAVESTWTDFQDSFQHSLCMIQFMK 1014
XP_064412726  751 MHTRRDFELAQAYLALFLKLHLKVIVEDPTLLEETSKVSTQLEETWAHMQTLFNQSMCLLGYMK 814  coelacanth
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