6FAI


Conserved Protein Domain Family
LTV

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pfam04180: LTV (This model is not part of the current CDD release)
Low temperature viability protein
The low-temperature viability protein LTV1 is involved in ribosome biogenesis 40S subunit production.
Statistics
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PSSM-Id: 516084
Aligned: 99 rows
Threshold Bit Score: 213.737
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6FAI_j          8 KNSQRYVVVHRPHDDPSFYDTDASAHVLVPvSNPNk-tSPEADLRKKDVSSTKPk--GRRAHVGEAALYGINFDDsEYDY 84  Saccharomyces ...
13_pfamImport   3 KNAITFRLVHRSQRDPLITDDKAPQHVLQQiRD---------------------------ERKDELEKYGIYYDD-DYDY 54 
XP_002074831   12 KKAVTFHLVHRSQHDPLVTDETAPQRVLLEaGAR-----------QKPS--QSEtpiDPSKKQEELKKFGIHFDD-DYDY 77 
XP_001961268   12 KKAVTFHLVHRSQHDPLVTDENAPQRVLLEaASR-----------QSKSKAQDEtpvDPAKRQEEQKKFGIHFDD-DYDY 79 
XP_002033303   12 KKAVTFHLVHRSQHDPLVTDENAPQRVLLEaAAR-----------QQKPK-DPEpptDPAQRQEELKKFGIHFDD-DYDY 78 
XP_002050054   12 KKAVTFHLVHRSQHDPLVTDETAPQRVLLEaTAR-----------QSQAKPQNEepsDPAKRQEELKKFGIHFDD-DYDY 79 
XP_002005780   12 KKAVTFHLVHRSQHDPLVTDETAPQRVLLEaSAR-----------QSQSKPQDEatvDPEKRREELKKFGIHFDD-DYDY 79 
XP_049546962   10 KNSVTFRLVNRSQQDPLYVDETAPQNVLLPvRVPEkyaNLAG---GIKRQATSGlnvDPTKRKTEQAKFGIYYDD-DYDY 85 
Q17MQ1         10 KKAVTFRLVNRSQQDPLYVDETAPQHVLVPiSAPGk--GDPRSFASAMRPSSSAgqmDTEKRKKEQAKFGVYFDD-DYDY 86  yellow fever m...
XP_046447962   11 KNAVTFNLVHRSQKDPLAADEQAPQRVLVPiAL---------KPEKSTEIPASSkpkDPAQQKEELAKLGIYFDD-DYNY 80  common water flea
6FAI_j         85 TQHLKPIGLdpeNSIFIAS--K-GNEqK----V-----EkkniedlfIEpkyrrdeieKDDALP--VFQRGMAKPEYLlh 150 Saccharomyces ...
13_pfamImport  55 LQHLKEKSS---EVEMIEVptKiVNKeKvktkSs------------------------gKLALPssVFASECEEKVGL-- 105
XP_002074831   78 MQHLKKRE----NDVVWEYmeNpNQAkKrqgdElps---------ssTA---------PKLQLPssVFASEFEESEGM-- 133
XP_001961268   80 MQHLKKRE----NDVVWEYmeNpNQArKrqeeEk------------------------pKLVLPssVFASEFEESEGM-- 129
XP_002033303   79 MQHLKKRE----NDVVWEFieNpNQArKqkdsEip-----------gPA---------PKLMLPssVFASEFEESEGM-- 132
XP_002050054   80 MQHLKKRE----NDVVWEYmeNpNQAkKstveDs------------kSR---------NLLVLPssVFASEFEESEGM-- 132
XP_002005780   80 LQHLKKRE----NDVVWEYmeNpNQAkKtnaeDs------------kAQ---------TKLLLPssVFASEFEESEGM-- 132
XP_049546962   86 LQHLREPGR---NEVYWEPidTkATKeQpg----------------aKN---------VRIQLPssVFPSEFEEKEGI-- 135
Q17MQ1         87 LQHLREPGR---NEVYWEPvePaKTAgA-------------------EK---------VSIKLPssVFASEVEEAEGL-- 133 yellow fever m...
XP_046447962   81 LQHLRDVK----QTAEWELaeDsKNSrVwkapVarglsD--------HP---------YKLALPssVFQSKVEEKVGL-- 137 common water flea
6FAI_j        151 QQDTTDEIRGFKPDMNPalrEVLEALEDEAYVVnddvvvediskktqlqgdnyGeeekEDDIFAQLLG-SG--EA---KD 224 Saccharomyces ...
13_pfamImport 106 LNKAAPKS-GLQLDLDP---DIVAAMDEDFDYS--------------------DpenmLDDDFVLLANaTPegKYksgSQ 161
XP_002074831  134 LNKAAPQ--SLRLDWDP---DVMAALDSDCENDne----------------------dLDDDFVAQAMgDGdd------- 179
XP_001961268  130 LNKAAPQ--TLRLDWDP---DVVAALDSDCEne------------------------eLDDDFVMQAMgEGdsd------ 174
XP_002033303  133 LNKAAPQ--TLRLDWDP---DVVAALDSDCEne------------------------eLEDDFVMQAMaEGdsd------ 177
XP_002050054  133 LNKAAPQP-GPRPDWDP---EVVAALDSDFEDNe-----------------------eLEDDFVMQAMgSDd-------- 177
XP_002005780  133 LNKAAPQP-GPRPDWDP---DVVAALDSDFEDTe-----------------------eLEDDFVMKAMgSGd-------- 177
XP_049546962  136 MKKVANARPGPRPDWDP---EIVAALDDDFDFD--------------------NpdnvLEDDFMDRVMqAGdvGV----- 187
Q17MQ1        134 MKKKAQQRPGPRPDWDP---DVVAALDEDFNFE--------------------DpnneLEDNFMELAMgGEgaGdd---- 186 yellow fever m...
XP_046447962  138 LNRAAPHS-GPRPDLDP---DIVAALDDDFNFD--------------------DpdneLEDDFIAFANgVPsdV------ 187 common water flea
6FAI_j        225 E---DEFEDE-------------------FDEW------D----------IDNVE----NFEdenyvkemaqfdniENLe 262 Saccharomyces ...
13_pfamImport 162 ElnsKNSHCKntfadvlgsmyseivfrdsENEEdy--tdD----------DSDVDddeeED------------------- 210
XP_002074831  180 -------------------------------------ddEysdyeeedddDMEIDsdnlNEDe-------------NDDe 209
XP_001961268  175 -------------------------------------deEwdgde-eedeEMDFDsddlNEEdd----------geNDDe 206
XP_002033303  178 -------------------------------------deEwddedgeeqsDMDFDsddlNEDe-------------NEDe 207
XP_002050054  178 ------------------------------DEEggedddDwqde--ndenDMDFDsdnlNEDe-------------NADe 212
XP_002005780  178 -----------------------------eDEEgd--deDwede--deenDMDFDsdnlNEDe-------------NADe 211
XP_049546962  188 --------------------------------Ddl--leDpedg---edeDDEFDsdgaEDD--------------YSDe 216
Q17MQ1        187 --------------------------------------eDffdeededgeYSDVDsndaAMSd-------------DDDe 215 yellow fever m...
XP_046447962  188 --------------------------------------------------ETDEdd-gsSGDde----------eeNDDv 206 common water flea
6FAI_j        263 dleNIDYQADVRRFQKDNSILEkhnsddefsnagldsvnpseeedvlgelpsiqdksktgkkkrksrqkkgamsdVSGFS 342 Saccharomyces ...
13_pfamImport 211 ------------RFDMEETKSR-----------------------------------------------------FTEYS 225
XP_002074831  210 lmdRLAPLMRERRFDDEEVKSR-----------------------------------------------------FTEYS 236
XP_001961268  207 lmdRLAPLMRERRFDDEEVKSR-----------------------------------------------------FTEYS 233
XP_002033303  208 lmdRLAPLMRERRFDDEELKSR-----------------------------------------------------FTEYS 234
XP_002050054  213 lmdRLGPLMRKGRFDDEETKSR-----------------------------------------------------FTEYS 239
XP_002005780  212 mmdRLGPLMRKSRFDDEETKSR-----------------------------------------------------FTEYS 238
XP_049546962  217 erdGLGPL--MDEYGREETKSR-----------------------------------------------------FTEYS 241
Q17MQ1        216 erdGLGPL----AFDREETKSR-----------------------------------------------------FTEYS 238 yellow fever m...
XP_046447962  207 lcdMRSDSGQRSPDFNDDNKSH-----------------------------------------------------FTEYS 233 common water flea
6FAI_j        343 MSSSAIARTETMTVLDDQYDQIINGYENYEeeleedeEqnyqpfDMS--------------------------------- 389 Saccharomyces ...
13_pfamImport 226 MTSSVIRRNEQLTMLDGRFEEMFSQYDDNEigaldceEieg-dlDSKdkmleniieqyetthvkfrsqeplkl------- 297
XP_002074831  237 MSSSVIRRNDQLSLLDDRFEKFYASYDDPElgdlsleDieg-nwHQKhpvvmqcfqefkkkdktleynkewdrer----- 310
XP_001961268  234 MSSSVIRRNEQLTLLDDRFEKFYASYDDPElgdlsleDieg-nwHQKhpvvmqcfqefkkkdktieynkewdrer----- 307
XP_002033303  235 MSSSVIRRNEQLSLLDDRFEKFYATYDDPElgdlaleDieg-nwHQKhpvvmqcfqefkkkdksieynkewdrer----- 308
XP_002050054  240 MSSSVIRRNEQLSLLDDRFEQFYASYDDPElgdlaleDieg-hwHQKhpvvmqcfqefkkknedlhydkewdrer----- 313
XP_002005780  239 MSSSVIRRNEQLSLLDDRFEQFYASYDDPElgdlaleDieg-qwHQKhpvvmqcfqefkkknedlkydkewdrer----- 312
XP_049546962  242 MSSSVIRRNEQLTLLDDRFEKFYEQYDDPEvgaldceEieg-hvEVNddvllqyaeayrrengdecidekekkw------ 314
Q17MQ1        239 MSSSVIRRNEQLSLLDDRFEKFYEQYDDPElgaldceDieg-hvEINdsvllqyaeeyrkerdekydvdydkqw------ 311 yellow fever m...
XP_046447962  234 MTSSVIRRNAQLSLLDDRFEHMMAQYDDEEmgaldceEieg-hiTLQddevlklaaayehdktegirlgreigkvardev 312 common water flea
6FAI_j        390 ---------------------------AERSDFESMLDDFLDNYEL 408 Saccharomyces cerevisiae S288C
13_pfamImport 298 --eptvmpdfsessdsdsensvvevkeKEKWDCESILSTYSTLYNH 341
XP_002074831  311 iekyrnvvdgeqdptdelidyevndpkEKKWDCESILSTYSNCYNH 356
XP_001961268  308 iekyrnvvdgeqdpteelveyevedpkQKKWDCESILSTYSNIYNH 353
XP_002033303  309 iekyrnvvegeedpteelveyevddpkQKKWDCESILSTYSNIYNH 354
XP_002050054  314 ikkyskvvdgendpteelvdyevddskEKKWDCESILSTYSNIYNH 359
XP_002005780  313 ikkyenvvdgehdptdelvdyevedgkEKKWDCESILSTYSNIYNH 358
XP_049546962  315 ikervlkfheedddeeelvdmpvedeeEKKWDCESILSTYSNIYNH 360
Q17MQ1        312 dkerilklhevssdeeemvvlevedetQKKWDCESILSTYSNCYNH 357 yellow fever mosquito
XP_046447962  313 egaverylekyqsdeendsssseegeqERKWDCESILSTYSNIYNH 358 common water flea
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