6FAI


Conserved Protein Domain Family
LTV

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pfam04180: LTV 
Low temperature viability protein
The low-temperature viability protein LTV1 is involved in ribosome biogenesis 40S subunit production.
Statistics
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PSSM-Id: 398035
Aligned: 107 rows
Threshold Bit Score: 224.867
Threshold Setting Gi: 0
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6FAI_JJ               8 KNSQRYVVVHRPHDDPSFYDTDASAHVLVPvSNPNktSPEADLRKKD---VSSTKPk--GRRAHVGEAALYGINFDDsEY 82 
XP_002005780         12 KKAVTFHLVHRSQHDPLVTDETAPQRVLLEaSARqs-------------qSKPQDEatvDPEKRREELKKFGIHFDD-DY 77  Drosophi...
WGS:AANI:GJ20401-PA  12 KKAVTFHLVHRSQHDPLVTDETAPQRVLLEaTARqs-------------qAKPQNEepsDPAKRQEELKKFGIHFDD-DY 77  Drosophi...
WGS:AAQB:GK23272-PA  12 KKAVTFHLVHRSQHDPLVTDETAPQRVLLEaGARqk-------------pS--QSEtpiDPSKKQEELKKFGIHFDD-DY 75  Drosophi...
XP_001961268         12 KKAVTFHLVHRSQHDPLVTDENAPQRVLLEaASRqs-------------kSKAQDEtpvDPAKRQEEQKKFGIHFDD-DY 77  Drosophi...
XP_002033303         12 KKAVTFHLVHRSQHDPLVTDENAPQRVLLEaAARqq-------------kPK-DPEpptDPAQRQEELKKFGIHFDD-DY 76  Drosophi...
Q17MQ1               10 KKAVTFRLVNRSQQDPLYVDETAPQHVLVPiSAPG----KGDPRSFAsamRPSSSAgqmDTEKRKKEQAKFGVYFDD-DY 84  yellow f...
EDS30515             10 KKAVTFRLVNRSQQDPLFVDENAPQHVLVPvSAPG--RSDDDPRap---sRASTSGgkvEPEKRKQEQAKFGVYFDD-DY 83  southern...
Q7PPS6               11 KTAVTFRLVNRSQHDPLYVDETAPQHVLVPvRVP--------PKya---sLIANSNrpiDAAKRKKEQAKFGIFFDD-DY 78  Anophele...
1_pfamImport          3 KKAVTFHLVHRSQRDPLAADEKAPQHVLLHaNKv-------------------------EPDKRREEQREFGVFFDD-DY 56 
6FAI_JJ              83 DYTQHLKPIGLdpeNSIFIAS--Kg-NEQK----V-----EkknIEDl------fIepkyrrdeiekddALP--VFQrGM 142
XP_002005780         78 DYLQHLKKRE----NDVVWEYmeNpnQAKKtnaeDska--------------qtkL-------------LLPssVFAsEF 126 Drosophi...
WGS:AANI:GJ20401-PA  78 DYMQHLKKRE----NDVVWEYmeNpnQAKKstveDsks--------------rnlL-------------VLPssVFAsEF 126 Drosophi...
WGS:AAQB:GK23272-PA  76 DYMQHLKKRE----NDVVWEYmeNpnQAKKrqgdElpsss-----------tapkL-------------QLPssVFAsEF 127 Drosophi...
XP_001961268         78 DYMQHLKKRE----NDVVWEYmeNpnQARKrqeeEkp-----------------kL-------------VLPssVFAsEF 123 Drosophi...
XP_002033303         77 DYMQHLKKRE----NDVVWEFieNpnQARKqkdsEipgp-------------apkL-------------MLPssVFAsEF 126 Drosophi...
Q17MQ1               85 DYLQHLREPGR---NEVYWEPvePakTAGAek---------------------vsI-------------KLPssVFAsEV 127 yellow f...
EDS30515             84 DYLQHLREPGR---NEVYWEPvqPakTAGAek---------------------vsI-------------KLPssVFAsEV 126 southern...
Q7PPS6               79 DYLQHLREPGR---NEVVWEPvaGkpSPKPaaetGeengvEev----------srI-------------KLPssVFAsEF 132 Anophele...
1_pfamImport         57 NYLQHLKEAAP---TAELVADepAhgNRPTlrlrGdddddDeeeDRDvldvqaasI-------------NLPssVFAsEF 120
6FAI_JJ             143 AKPEYLlhQQDTTDEIRGFKPDMNPalrEVLEALEDEAYVVnddvvvediskktqlqgdnyGeeekEDDIFAQLLG-SG- 220
XP_002005780        127 EESEGM--LNKAAPQP-GPRPDWDP---DVVAALDSDFEDTe-----------------------eLEDDFVMKAMgSGd 177 Drosophi...
WGS:AANI:GJ20401-PA 127 EESEGM--LNKAAPQP-GPRPDWDP---EVVAALDSDFEDNe-----------------------eLEDDFVMQAMgSDd 177 Drosophi...
WGS:AAQB:GK23272-PA 128 EESEGM--LNKAAPQ--SLRLDWDP---DVMAALDSDCENDne----------------------dLDDDFVAQAMgDGd 178 Drosophi...
XP_001961268        124 EESEGM--LNKAAPQ--TLRLDWDP---DVVAALDSDCEne------------------------eLDDDFVMQAMgEGd 172 Drosophi...
XP_002033303        127 EESEGM--LNKAAPQ--TLRLDWDP---DVVAALDSDCEne------------------------eLEDDFVMQAMaEGd 175 Drosophi...
Q17MQ1              128 EEAEGL--MKKKAQQRPGPRPDWDP---DVVAALDEDFNFE--------------------DpnneLEDNFMELAMgGEg 182 yellow f...
EDS30515            127 EEEDGL--MKKKAQMRPGPRPDWDP---DVVAALDEDFDHE--------------------NpdnaLEDNFMELAMgGEg 181 southern...
Q7PPS6              133 EEKDGL--MKKAAEVTRGPRPDWDP---DVVAALDEDFDFN--------------------NpdnqLEDNFMELAMqPGa 187 Anophele...
1_pfamImport        121 EEKVGL--LNKAAPIS-GPRLDMDP---DIVAALDEDFDFD--------------------DpdnlLDDDFIARANtASa 174
6FAI_JJ             221 -EAkdedefedE------F----------DEWdIDNVENFEDenyvkemaqfdnienLEDLENIDYQADVRRFQKDNSIL 283
XP_002005780        178 e--------deEgd--deDwede--deenDMD-FDSDNLNEDen------------aDEMMDRLGPLMRKSRFDDEETKS 232 Drosophi...
WGS:AANI:GJ20401-PA 178 d---------eEggedddDwqde--ndenDMD-FDSDNLNEDen------------aDELMDRLGPLMRKGRFDDEETKS 233 Drosophi...
WGS:AAQB:GK23272-PA 179 d---------------ddEysdyeeedddDME-IDSDNLNEDen------------dDELMDRLAPLMRERRFDDEEVKS 230 Drosophi...
XP_001961268        173 sd--------------deEwdgde-eedeEMD-FDSDDLNEEddg---------endDELMDRLAPLMRERRFDDEEVKS 227 Drosophi...
XP_002033303        176 sd--------------deEwddedgeeqsDMD-FDSDDLNEDen------------eDELMDRLAPLMRERRFDDEELKS 228 Drosophi...
Q17MQ1              183 aGdd-------------eDffdeededgeYSD-VDSNDAAMSdd------------dDEERDGLGPL----AFDREETKS 232 yellow f...
EDS30515            182 eD----------------Dyfdeg-eedeYSD-VDSNEAGMSda------------dDEERDGLGPL----AFDREETKS 227 southern...
Q7PPS6              188 gGd-------eDdd--geDwfde---eggEHE-FDSDEMEGDys------------dTEERDGLGPL--DDRYGREETKS 240 Anophele...
1_pfamImport        175 aGEgdcg-dedEd----dEwed----tdeEGD-FGSEGGLSGde------------------dLGRRAREFLFMDEETKS 226
6FAI_JJ             284 EkhnsddefsnagldsvnpseeedvlgelpsiqdksktgkkkrksrqkkgamsdVSGFSMSSSAIARTETMTVLDDQYDQ 363
XP_002005780        233 R-----------------------------------------------------FTEYSMSSSVIRRNEQLSLLDDRFEQ 259 Drosophi...
WGS:AANI:GJ20401-PA 234 R-----------------------------------------------------FTEYSMSSSVIRRNEQLSLLDDRFEQ 260 Drosophi...
WGS:AAQB:GK23272-PA 231 R-----------------------------------------------------FTEYSMSSSVIRRNDQLSLLDDRFEK 257 Drosophi...
XP_001961268        228 R-----------------------------------------------------FTEYSMSSSVIRRNEQLTLLDDRFEK 254 Drosophi...
XP_002033303        229 R-----------------------------------------------------FTEYSMSSSVIRRNEQLSLLDDRFEK 255 Drosophi...
Q17MQ1              233 R-----------------------------------------------------FTEYSMSSSVIRRNEQLSLLDDRFEK 259 yellow f...
EDS30515            228 R-----------------------------------------------------FTEYSMSSSVIRRNEQLSLLDDRFEK 254 southern...
Q7PPS6              241 R-----------------------------------------------------FTEYSMSSSVIRRNEQLTLLDDRFEK 267 Anophele...
1_pfamImport        227 R-----------------------------------------------------FTEYSMTSSVMRRNEQLTLLDDRFEK 253
6FAI_JJ             364 IINGYENYEEELeedeEqnyqpfDMSA----------------------------------------------------- 390
XP_002005780        260 FYASYDDPELGDlaleDieg-qwHQKHpvvmqcfqefkkknedlkydkewdrerikkyenvvdgehdptdelvdyevedg 338 Drosophi...
WGS:AANI:GJ20401-PA 261 FYASYDDPELGDlaleDieg-hwHQKHpvvmqcfqefkkknedlhydkewdrerikkyskvvdgendpteelvdyevdds 339 Drosophi...
WGS:AAQB:GK23272-PA 258 FYASYDDPELGDlsleDieg-nwHQKHpvvmqcfqefkkkdktleynkewdreriekyrnvvdgeqdptdelidyevndp 336 Drosophi...
XP_001961268        255 FYASYDDPELGDlsleDieg-nwHQKHpvvmqcfqefkkkdktieynkewdreriekyrnvvdgeqdpteelveyevedp 333 Drosophi...
XP_002033303        256 FYATYDDPELGDlaleDieg-nwHQKHpvvmqcfqefkkkdksieynkewdreriekyrnvvegeedpteelveyevddp 334 Drosophi...
Q17MQ1              260 FYEQYDDPELGAldceDieg-hvEINDsvllqyaeeyrkerdekydvdydkqwd-kerilklhevssdeeemvvlevede 337 yellow f...
EDS30515            255 FYEQYDDPELGAldceDieg-hvDINDsvlmqyaeeyrkerdekyevaydkqwd-kerilklqevssdeeemvvlevede 332 southern...
Q7PPS6              268 FFEQYDDPEVGPldceEieg-hvDPNDdvllrcaaefkrerdavydaeyekqwi--rerltqlqddnseeeevamqvedg 344 Anophele...
1_pfamImport        254 FYEQFDDDEIGAldnaEleg-siQPDSarleevikdyfvqkhkdhlk----------------ldemgpkelpvrivvwa 316
6FAI_JJ             391 --ERSDFESMLDDFLDNYEL---------------------------ESGgrKLA------------------------- 416
XP_002005780        339 keKKWDCESILSTYSNIYNHpklidepranr------raapikidpkTGLpaNVLrggtdaqltakalanladdsadna- 411 Drosophi...
WGS:AANI:GJ20401-PA 340 keKKWDCESILSTYSNIYNHpklideprstr------rsapiqidpkTGLpaNVLrggadaqltakalanladdssnta- 412 Drosophi...
WGS:AAQB:GK23272-PA 337 keKKWDCESILSTYSNCYNHpklideprrsrrssssanavpiqidpkTGLpaNVLrggvegqltakalanlddsspnat- 415 Drosophi...
XP_001961268        334 kqKKWDCESILSTYSNIYNHpklideprrsrrssastntapiqidpkTGLptNVLrggvdgqltakalanladdspaaa- 412 Drosophi...
XP_002033303        335 kqKKWDCESILSTYSNIYNHpkvideprrsrrssastnpapiqidpkTGLptNVLrggvdgqltakalanladespaat- 413 Drosophi...
Q17MQ1              338 tqKKWDCESILSTYSNCYNHpklieepkkrr------saakisinpkTGLpmNTLgsdsgkltmkslakheldasapkp- 410 yellow f...
EDS30515            333 sqKKWDCESILSTYSNIYNHpklieeprk---------apkisinpkTGLpmNVLgadgskltvkslaklgqdesspskp 403 southern...
Q7PPS6              345 eqKKWDCESILSTYSNIYNHpkliqepkk---------trkilinpkTGLpeNVLgaeggkltmksiarleqggsekpa- 414 Anophele...
1_pfamImport        317 qdEKWDCETIISTYSNIYNRpkiiqdppk---------mkpirvsqkTGIplDVLpakgltakqaermali--------- 378
6FAI_JJ             417 ------------------------KKDKEIERLKEAaDEVSKGKLSQR 440
XP_002005780        412 -gpkslcaksvlstlsvlsirpkdETPEEKRERKRLlKDYRSERRIEK 458 Drosophila mojavensis
WGS:AANI:GJ20401-PA 413 -gpkslcaksvlstlsvlsirpkdETPEEKRERKRLlKDYRNERRIER 459 Drosophila virilis
WGS:AAQB:GK23272-PA 416 -gpkslcaksvlstlsvlsirpkdETPEEKKERKRLiKDYRQERRIER 462 Drosophila willistoni
XP_001961268        413 -gpkslcaksvlstlsvlsirpkdETPEEKKERKRLlKEYRNDRRVEK 459 Drosophila ananassae
XP_002033303        414 -gpkslcaksvlstlsvlsirpkdETPEEKKERKRLlKDYRNERRIEK 460 Drosophila sechellia
Q17MQ1              411 ggpkslcdgsvistlsvlsirpkdETLEEKRERKKLlKEYRAERRIER 458 yellow fever mosquito
EDS30515            404 tgpkslcdgsvistlsvlsirpkdETPEEKRERKKLlKEYRAERRIER 451 southern house mosquito
Q7PPS6              415 -gpkslcdgsvistlsvlsirpkdETPEEKRERKKLlKEYRSERRIER 461 Anopheles gambiae str. PEST
1_pfamImport        379 --------ndqdlqrvstlprdkeESTEERKARKQAiKEERKERRVEK 418
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