2APO


Conserved Protein Domain Family
Nop10p

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pfam04135: Nop10p 
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Nucleolar RNA-binding protein, Nop10p family
Nop10p is a nucleolar protein that is specifically associated with H/ACA snoRNAs. It is essential for normal 18S rRNA production and rRNA pseudouridylation by the ribonucleoprotein particles containing H/ACA snoRNAs (H/ACA snoRNPs). Nop10p is probably necessary for the stability of these RNPs.
Statistics
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PSSM-Id: 398004
Aligned: 122 rows
Threshold Bit Score: 61.0374
Threshold Setting Gi: 506244053
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2APO_B             3 EXRXKKCPKcGLYTLK-EICPKcGEKTVIPKPPKFSLEDRWGKYRRXLKRAL 53  Methanocaldococcus jannaschii
Q05E71             2 QWLLRKCRRcGRYTLRrDACPVcGGPVAVPHPPRFSPDNRFIKYRYELQKKL 53  Aeropyrum pernix
EQB67365           2 KTLIRKCANcGKYTME-EKCPVcGSQTRNTDPLKYSPSDKFQKFRIKEKEEe 52  Thermoplasmatales archaeon E-plasma
jgi:Vdis_2063      2 DSILRRCKNcGRYTLRkDKCPYcGGELEVPHPPKYSPDDKYGRYRLIMKVms 53  Vulcanisaeta distributa DSM 14429
WP_012186405       3 KSVMMKCTRcGKYTLRkDKCPYcGGQLTNPHPPRYSPDDRMWRYRLMLKVAl 54  Caldivirga maquilingensis
CCC81186           2 RSLLMRCTRcGAYTLRkDVCPKcGG-LWSAPSTEVQPEDKYQVYRIKMRvma 52  Thermoproteus tenax Kra 1
A8AAJ4             2 KFLMKKCVRcGRYTFK-DVCPVcNGQTTVPHPPRFSPEDKYVKYRVLAKLtk 52  Ignicoccus hospitalis KIN4/I
RogerUC:Ahos_1253  2 TWLIRKCPVdGTYTFQ-EKCPKcNTPTIVPHPPRFSPEDKYVKYRIEAKKGI 52  Acidianus hospitalis W1
Q973G1             2 KWKIKKCPKdCTYTLK-DICPIcGTPTIIPHPARFSPVDKYVKYRIEIKKGI 52  Sulfurisphaera tokodaii str. 7
Q97Z78             2 KWKMRKCPKdNIYTFK-DTCQIcGSKTVIPHPSRFSPEDKYVKYRIELKKGi 52  Saccharolobus solfataricus P2
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