5A9Q,7TBI


Conserved Protein Domain Family
Nup84_Nup100

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pfam04121: Nup84_Nup100 (This model is not part of the current CDD release)
Nuclear pore protein 84 / 107
Nup84p forms a complex with five proteins, of which Nup120p, Nup85p, Sec13p, and a Sec13p homologues. This Nup84p complex in conjunction with Sec13-type proteins is required for correct nuclear pore biogenesis.
Statistics
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PSSM-Id: 516050
Aligned: 107 rows
Threshold Bit Score: 467.537
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5A9Q_4       209 LWLLQQEMVTWRLLASLYRDRI-QS------------------------ALeeESVFAVTAVnA--SEKTVVEALFQRDS 261  human
XP_003955256  66 SNDWELEAKFWHLLELLLSFRTsEDt----------------------lDLe------SSVInGynSSAAFEKDLLHKDK 117 
XP_003675058  65 NNDWEQEARLWHLLDLLMSFRTaDHd----------------------tDRi------S--IeNynSNALFEKQLLQDDK 114 
XP_003668611  86 YNDWELEARFWHLLDLLISYRVsDHd----------------------mNDenENENHANVVyPynSSAIFEKDLLSKDH 143 
P52891        65 SKDWELEARFWHLVELLLVFRNaDL------------------------DLd------EMELhPynSRGLFEKKLMQDNK 114  Saccharomyces ...
XP_004179287  73 FEDWQLEAKFWHLLELLTSFRTsENynqiinelqsdssnsnmedervdiTMgsTNFEDRIETkPynSSAIFERDLLQSNR 152 
XP_001645697  66 NSDLVLEANFWHLVEILLSFRTsQEf----------------------lDKe-----sSISSkPynSSIIFEKELLQKDK 118 
XP_003684943  83 SSDFELEAKLWHLTELILDFRMsS-------------------------DDdnLDGVSNIKAkPynSNIVYEKECLENNK 137 
XP_003682828  63 SSDWELEAKLWHLFELLLSFRTs------------------------------DQELEITEVrHynSDAVFEKQLLHENR 112 
7TBI_R2       65 sKDWELEARFWHLVELLLVFRN-AD------------------------LDldE-----MELhPynSRGLFEKKLMQDNK 114  brewer's yeast
5A9Q_4       262 LVRQSQLVVDWLESIAkdeiGEFSdniefyakSVYWENTLHTLkqRQltsyvgsvrplvtELDPDAPIRQK-MP--LDDL 338  human
XP_003955256 118 QLYQIWIIMVWLQENItleeKPKNlp------tSKWSNSVLTg-vLK-------------SADLDAPLRNV-HNq-IDVK 175 
XP_003675058 115 KLYQIWIIMVWLQENMtiqeRPDNlp------tSKWTQTLISg-nLE-------------SADLDYPLRNV-GVt-IEQK 172 
XP_003668611 144 QLYQIWIIIVWLQENRtvgeRPTSlp------tSKWVNTLISGggLK-------------SSDLDARLRDP-AVvkLHEK 203 
P52891       115 QLYQIWIVMVWLKENTyvmeRPKNvp------tSKWLNSITSg-gLK-------------SCDLDFPLREN-TNv-LDVK 172  Saccharomyces ...
XP_004179287 153 ELYEIWIIIVWLQSNRqqkeRPLNlp------vTKWSSSMISg-tLK-------------SSDLDEPLRNP-ESg-IDIK 210 
XP_001645697 119 NLYQIWLIIVWIEGNFpfveKPSNip------sSKWTNTLVTs-gLM-------------SSDLDYPLRDC-SVv-INDK 176 
XP_003684943 138 SLHEIWIIIYWLQSNLprveRPNDip------gTKWNNTMVSg-nLH-------------SVDLDSPLRDA-NVi-IDAK 195 
XP_003682828 113 ELYQIWIIIVWIQDNMrepeRPSRlp------aSKWSNTMISg-gIK-------------SSDLDYPLREK-KAe-IDPR 170 
7TBI_R2      115 QLYQIWIVMVWLKENTyvmeRPKNv------pTSKWLNSITSGglK--------------SCDLDFPLRENtNV--LDVK 172  brewer's yeast
5A9Q_4       339 DREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHDPNVngg--telEPVEGNPYRRIWKISCWRMAE 416  human
XP_003955256 176 DKEEDHIFYKHIYNLLLAGQFEAAFSECKSSDNITLCMIFCGMQEYLNPKIdtqfaeefEVQQGVKKHALWRRTVYNLSQ 255 
XP_003675058 173 DKEQDHIFFQYIYHLLLAGKYEEAFEECKLSENLTLNMILCGIQEYVNPAIdtqianefEMQQGVKKHALWRRAVYNLSQ 252 
XP_003668611 204 DIQDDQMFFKYIYDLLLSGNYDELFDECRLSENLTFSMILCGMQEYVNPKIdtqvdnefDSQQGVKKHALWRRAVFALSK 283 
P52891       173 DKEEDHIFFKYIYELILAGAIDEALEEAKLSDNISICMILCGIQEYLNPVIdtqianefNTQQGIKKHSLWRRTVYSLSQ 252  Saccharomyces ...
XP_004179287 211 DRLDDSIFYKYIFELLLSGKIDLAIEECNLSENITLAMILCGLKEYSNPAIdfpntsgsIKQSGIQKHALWRRTVFSLST 290 
XP_001645697 177 DKADDHVFYKYVYELLLCGNYDQIFEECKLSDNITLNMIMCGMQEYVDPSIdvqlkdefEVQQGVKKHSLWRRAVYSLSQ 256 
XP_003684943 196 DKVQDHVFYKYIFDLLLCGEYERVFEECKLSDNITMYMILCGMQEYVDPVVdsqlrngfEKQQGVKKRILWRRAVYNLSL 275 
XP_003682828 171 DKEEDSIFFKYIYELLIAGKVEEALEECKLSDNLTISMILCGMQLYVNPRVdtqlredfESQQGIKKHALWRRTVYSLSQ 250 
7TBI_R2      173 DKEEDHIFFKYIYELILAGAIDEALEEAKLSDNISICMILCGIQEYLNPVIdtqianefNTQQGIKKHSLWRRTVYSLSQ 252  brewer's yeast
5A9Q_4       417 DELFNRYERAIYAALSGNLKQLLPV--C-----DTWEDTVWAYFRVMVDSLVEQEIQTSvatldeteelpREYLGAN--- 486  human
XP_003955256 256 SPNLDPYERAIYNYLSGTMPSD-EIlkE-----TDWDSELLLNLNQILQINIENYMLQ------------NSKIEQSeli 317 
XP_003675058 253 CPDLNPYERAIYNYLSGTIPDT-GI--D-----ANWDSDFLLQLNQILQIEIENYLLK------------NGKINAEeli 312 
XP_003668611 284 SSNIGYYERAIYQYLAGVILED-NNagKdqailMDWETEFLLYLNQIFQIEVENYLLQ------------NNKFDSEelv 350 
P52891       253 QAGLDPYERAIYSYLSGAIPNQ-EVlqY-----SDWESDLHIHLNQILQTEIENYLLE------------NNQVGTDeli 314  Saccharomyces ...
XP_004179287 291 NKSLDKYERIIYNYLSGTLPDFDESvfTeileeLDWESHLILYLNQNLQISVENYLIS------------NSKIDTTeli 358 
XP_001645697 257 NDKLDKYERAIYSYLAGDIPND-EVlqT-----LNWDSELLVYLNQILKIEVENYLLQ------------NGKVNNDeli 318 
XP_003684943 276 NDSLDSYERAIYSYLAGDFPNDEEVrsN-----LSWAKELLIYLNQIMNIEIENYLMK------------EEKVTKDeli 338 
XP_003682828 251 NTELNYYERAIYSFLAGDIPPE-EVmnI-----SSWDSGLLVYLNQILQIEVENYLNS------------ENKISKDeli 312 
7TBI_R2      253 QAGLDPYERAIYSYLSGAIPNQEVL--Qy----SDWESDLHIHLNQILQTEIENYLLEN------------NQVGTDeli 314  brewer's yeast
5A9Q_4       487 --------WTLEKVFEELQATdkkRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSksRnNL---------PGHLLRF 549  human
XP_003955256 318 yplpdtamSM-ENVLNLVSSK----HQKESEHPIRVLIGAVILNTLSSVLHSSVEMLLdi-vKGietsndlldEPYLLRI 391 
XP_003675058 313 tplpmyakSL-DKILNSLSER----YPMESESPMKVLMGAIILDTLPSVLHSSVEMLLdi-iKGkessndlldEPYLLRV 386 
XP_003668611 351 lqlpsksiSL-PDILNLLASK----YPTESESPIRVLIGAIILDKLPSLVHSSVEMLQdl-vAGeennndlldEPYLLRV 424 
P52891       315 lplpshalTV-QEVLNRVASR----HPSESEHPIRVLMASVILDSLPSVIHSSVEMLLdv-vKGteasndiidKPYLLRI 388  Saccharomyces ...
XP_004179287 359 lalpnipiPI-NDILNLISLR----HPKDSEHPIRILMASVILDTTPSVVHSSIIMLAni-iNGidndnelinEPYLLRI 432 
XP_001645697 319 lslpsntmDL-QSILNLLSAK----HPEESEHPIRVLIGSVMLNTIPSVLHSSVSMLMnv-vTGiendndifgEPYLLRV 392 
XP_003684943 339 lalpsksmDL-QSILNLLSNK----YSTEAAHPLRVLIGAVILDTLPSVLHSSVSMLMdv-vNGndddndlfhEAYLLRI 412 
XP_003682828 313 fslpshpnDS-QTVLNRLSLA----YPQESEHPIRVLIGGIILNTLEPVLNSAVKLLMem-vQGqtaendlaeKPYLLRI 386 
7TBI_R2      315 lp-lpshaLTVQEVLNRVAS----RHPSESEHPIRVLMASVILDSLPSVIHSSVEMLLdvV-KGteasndiidKPYLLRI 388  brewer's yeast
5A9Q_4       550 MTHLILFFRTLGlQtKEEVSIE----VLKTYIQLLIREKHTNLIAFYTCHLPQDLAVAQYALFLESVTEFEQRHHCLELA 625  human
XP_003955256 392 VTHLSIILDII--Tp-GIVSNDdkvkLITAYISILKLQKLYDLIPVYVCFLNESDSLEAYSFILCTLEDPHIRQKQLKLM 468 
XP_003675058 387 VTHLSIFIDVI--Tp-GAVPKGdkykLVTAYISILKMHGYYDCIPIYISFLEDDEILNAYSFVLSTMNEPELRQNQLELM 463 
XP_003668611 425 MTHLVIFLDFV--Tp-GIISKLdkkrLITAYISILKLHGLYESIPIYINFLEPEDALEAYSFILSTMEDPIVREKQLKLM 501 
P52891       389 VTHLAICLDII--Np-GSVEEVdkskLITTYISLLKLQGLYENIPIYATFLNESDCLEACSFILSSLEDPQVRKKQIETI 465  Saccharomyces ...
XP_004179287 433 LAHLTIILDCI--Kp-NSIPNQdkskLITTYVSLLRMHKLYDTLPIYVSFLDDEVILESYSILLSTIEDPLIRTEQIKLS 509 
XP_001645697 393 VTHMTIFLEIL--Np-GTISESdktkLITAYISILKSQELYDLIPIYISFLSHNEAIEASSFILSNLEGKDIRKKQLEIC 469 
XP_003684943 413 VTHMSIFIELL--Np-EVVSKEdnynLITAYITVLRLHSLLEYIPVYVKFIDSDKGIDAYSFILSTLKDPDTRLKQIEIS 489 
XP_003682828 387 VTHMSILLDII--Sp-GLVSKRnkskLITAYISIMKLHELYDVIPVYIDFLDSEEIVDAYSFVLSTLEDPDVRKKQIEIA 463 
7TBI_R2      389 VTHLAICLDIIN---PGSVEEVdkskLITTYISLLKLQGLYENIPIYATFLNESDCLEACSFILSSLEDPQVRKKQIETI 465  brewer's yeast
5A9Q_4       626 KEADLDVATITKTVVe-NIRKKDNgefshhdlapalDTGTTEEDRLKIDVIDWLvFDPAQRAEALKQGNAIMRKFLASKK 704  human
XP_003955256 469 SFLNLPVSNILKRTTqrVFVETEAnytps--enisiTQDISLTDRHLIFSVEWL-IEGKLYDDSVEAIVAFARRLLINGK 545 
XP_003675058 464 KFLRLPVTNILKKTTsrVFTETEPeytpd--eeisvSFGITDTDKHLILAVEWL-LQGKLFTDALESVLALSRRFLINGK 540 
XP_003668611 502 IFLKLPKSDILKRTTqrVFTETESeyepk--neisvIFEVNDIDKHLIYNVEWL-LEGKYYMDAMEAVIALARRFLINGK 578 
P52891       466 NFLRLPASNILRRTTqrVFDETEQeysps--neisiSFDVNNIDMHLIYGVEWL-IEGKLYVDAVHSIIALSRRFLLNGR 542  Saccharomyces ...
XP_004179287 510 NFLKLPTANILRRTAerIFLETQInyvpn--esiniNFNVDEIDKHLIFGISWL-IDGELYGDSIDSIIALSRRFLLNGK 586 
XP_001645697 470 NFLKLPVEDMLKRTTqcVFAETESeytpv--gditiSFESSDIDRHLILGVDWL-IEGNLYEDAVESSIALSRRFLLNGK 546 
XP_003684943 490 NSLYLPIVNILKRTTerVFSETEQsyipn--tevliTKGVSDIDEHLILAVEWL-ILGKQYEDSIASVLALARRFLINGK 566 
XP_003682828 464 NFLRLPTSNILRKTTerIFAETEEeytpr--devsvTFDVPPVDKHLIFGVEWL-IQGKLYVDAVDSVIALSRRFLINGK 540 
7TBI_R2      466 NFLRLPASNILRRTTqrVFDETEQeysps--neisiSFDVNNIDMHLIYGVEWL-IEGKLYVDAVHSIIALSRRFLLNGR 542  brewer's yeast
5A9Q_4       705 HEAAKEVFVKI-PQDSIAEIYNQCee---qGM-----------------ESPLPAEDDNAIREHLCIRAYLEAHETFNEW 763  human
XP_003955256 546 IKSLEYFMDHNnIEEILQNYKIen-----iSMd----------------DDEHNDNDDTKVKEIKQYQALISGFKHYEEW 604 
XP_003675058 541 VKALDYFFRRNsMDDLLKAYKLei-----iSQ-----------------RDS-DEGPELKIEELLQYENLIHGLNRYEEW 597 
XP_003668611 579 VKALDFFFKRNsVDDLVKNYDLTKlaaqrmST-----------------DDD-SIILDCKTQELRQYERLIDGLNNYEQW 640 
P52891       543 VKALEQFMERNnIGEICKNYELek-----iAD-----------------NISKDENEDQFLEEITQYEHLIKGIREYEEW 600  Saccharomyces ...
XP_004179287 587 TKSLEYCYNNIdLPNIIKNYELek-----iMTnnntnalhnsindnkgkYHDDSNETDLKIKEIMQYQSLTEAFKRYEEW 661 
XP_001645697 547 VKSLEMFLDEKpIDDLLKNYQLsk-----iHE-----------------MDV-DSTEDTSVLEIQQYRYLINIFKQYMEW 603 
XP_003684943 567 VGALSLLFSRNeLSSLIKNYQLtk-----lEN-----------------SSY-DSNSDFSIKELKEYHYLTDIFKQYEEW 623 
XP_003682828 541 IKSLEYFINGNsLDDLLKNYELev-----iYQ-----------------RNH-DDEKESKKKEIQEYQRLIRELKKFEEW 597 
7TBI_R2      543 VKALEQFMERNnIGEICKNYELEKiad----------------------niSKDENEDQFLEEITQYEHLIKGIREYEEW 600  brewer's yeast
5A9Q_4       764 FKHMNSVPQkpalIPQPtFTEkvahehkekkyemdfgiWKGHLDALTADVKEKMYnvllfvdgGWMVDVREdak------ 837  human
XP_003955256 605 QKSIKLLNS------ESnIPS-----------------LIEKFQEYSKNTVELIK--------SFLVELTDdin------ 647 
XP_003675058 598 NKTIKLLNS------ESnIPS-----------------LIEKFQAYTRSTHDLIE--------NFLVNLSRdeg------ 640 
XP_003668611 641 NKTVKLLNS------ESnIPS-----------------LIEKFREYTDGTYDIIK--------TFLVDLTEnhd------ 683 
P52891       601 QKSVSLLSS------ESnIPT-----------------LIEKLQGFSKDTFELIK--------TFLVDLTSsnfa----- 644  Saccharomyces ...
XP_004179287 662 KKTVQSLNP------QSnIPT-----------------SIQKLQEYSEKTTNLVK--------IFLVELTDelnvknkri 710 
XP_001645697 604 EKTVKLLNS------ESnIPS-----------------IIEKFQEFFQSTFKLIK--------TFLVDLTEnid------ 646 
XP_003684943 624 HKSIKLLNT------QSnIPS-----------------LIEKFTEYSKNTTDLIK--------FFLVELTAntd------ 666 
XP_003682828 598 KDTVSKLNS------ESnVPS-----------------LIEKFQQYSRGTFDLIK--------HFFVELSEhed------ 640 
7TBI_R2      601 QKSVSLL------SSESnIPT-----------------LIEKLQGFSKDTFELIK--------TFLVDLTSsnf------ 643  brewer's yeast
5A9Q_4       838 --edHeRTHQMVLLRKLCLPMLCFLLHTILHSTg-------QYQECLQLADMVSSERHkLYLVFSKE-ELRKLLQKLRES 907  human
XP_003955256 648 -nldHt---VLFEIRSLYTPYLIIELHKGLVEAanllniptFINEALSFTNLVANETDkIYLLFQSSgKLKEYLQLVAYT 723 
XP_003675058 641 -ytgRd---IIYEIRALYTPYLIIELHKGLVEAakllkipkFISEALNYTDLVANETDkIYLLFQTSgKLKEYLQLVAHT 716 
XP_003668611 684 -hpeQe---ILHEIRSLYTPFLIIELHKGLVEAskllkipkFINEALNYTSLVANETDkIYLLFKSSnKLKEYLQLVANT 759 
P52891       645 dsadYe---ILYEIRALYTPFLLMELHKKLVEAakllkipkFISEALAFTSLVANENDkIYLLFQSSgKLKEYLDLVART 721  Saccharomyces ...
XP_004179287 711 skddFs---ILYEIRALYIPYLIIELHKGLIEAsrllnislLTKDALKYTTIVANETDkIYLLFQSCgKLKEYLQLIAHT 787 
XP_001645697 647 -hkdHd---ILFEIRALYTPYLIMELHKGLVEAasllriprFIKDALNITNLVANEDDkIYLLFQSSgKLKEYLQLVAQT 722 
XP_003684943 667 -gvdYd---ILFEIRALYTPYLIIELHKGLLEAasmlkipkFLDQALRFTDLVANEESkIYLLFQSSgRLKEYLKLVAYT 742 
XP_003682828 641 -hpdRe---IYYEIRSLYTPYLIIELHKELVEAamllkiptFIREALGFANLVANETDkIYLLFQSSgKLKEYLRLVAQT 716 
7TBI_R2      644 --adSaDYEILYEIRALYTPFLLMELHKKLVEAakllkipkFISEALAFTSLVANENDkIYLLFQSSgKLKEYLDLVART 721  brewer's yeast
5A9Q_4       908 S 908  human
XP_003955256 724 A 724 
XP_003675058 717 A 717 
XP_003668611 760 A 760 
P52891       722 A 722  Saccharomyces cerevisiae S288C
XP_004179287 788 A 788 
XP_001645697 723 A 723 
XP_003684943 743 A 743 
XP_003682828 717 A 717 
7TBI_R2      722 A 722  brewer's yeast
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