8TIE


Conserved Protein Domain Family
Nucleoporin2

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pfam04096: Nucleoporin2 (This model is not part of the current CDD release)
Nup98-96 autopeptidase S59
The nuclear pore complex protein plays a role in bidirectional transport across the nucleoporin complex in nucleocytoplasmic transport. The mammalian nuclear pore complex (NPC) is comprised of approximately 30 unique proteins, collectively known as nucleoporins. This entry includes yeast family members such as Nup145p as well as vertebrate Nup98. The NUP C-terminal domains of Nup98 and Nup145 possess peptidase S59 autoproteolytic activity. The autoproteolytic sites of Nup98 and Nup145 each occur immediately C-terminal to the NUP C-terminal domain. Thus, although this domain occurs in the middle of each precursor polypeptide, it winds up at the C-terminal end of the N-terminal cleavage product. Cleavage of the peptide chains are necessary for the proper targeting to the nuclear pore.
Statistics
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PSSM-Id: 516031
Aligned: 167 rows
Threshold Bit Score: 116.045
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8TIE_c         460 GYWCSPSPEQLERLSLKQLAAVSNFVIGRRGYGCITFQHDVDLTAFtksFREELfgkiVIFRSsKTVEVYPDEa--T--- 534  brewer's yeast
34_pfamImport    3 EYKTEPSMAELAKMTKDALTAVSGFVVTRQGYGSIAWKEPVDLRGV---DIGSV----VAIEH-KSVSVYDELa--Egee 72  
XP_002291099   654 GYNVYPPISELETMSEADLAAVADFKVERPGYGSVAWDGSVDVRGV---DLDSV----VVIET-KNVSVYDDAelnGd-- 723 
XP_002180245   784 GYIISPTLEELEKTEDADLAAVSDFSVKRPGFGMVEWEGDVDVRGA---DLDRI----ITIDQ-ADVSVYHADe--Aegs 853 
XP_002141590   947 SYYCIPSIEALSTFTEDRLAAVEDFRVIREGVGEIMWPGLTDLRGL---NLDHI----ISIEP-LCVSVYGED------- 1011
Q5CUL4         908 DYFCIPSIELLKTFSEERLAVVEDFKIVREGVGEIVWPGVTDLRGI---NLDSV----VSIEP-LCVSVYGDGd--Ss-- 975  Cryptosporid...
Q6BGM0         538 DYLCNVNFDEM---TEEELSNVENFTISNQ-FGQVRWLSPCNLLYL---DLDKI----VDLTQ-ECINLYDSEivn-dyl 604  Paramecium t...
A0CZF0         559 GYYTLPDINQL---TINQLKNVEDFTIFNE-FGSLRWDSPTNLLYI---NLDRI----VDIQD-SKVEVYDLDqih-eyl 625  Paramecium t...
XP_001032777   786 DYIINPPLEELQTYSLKELKNVHNFSVEGH-YGKLEWQEPVDLTDL---DIDKT----IYIRD-QQIQVYPEVeya-sky 855 
CEM32306       827 EYSCTPSIESMREMTEQELASVQDFTIRRGGVGEARWPGRTDMRQV---NLDRD----VKLEQ-GYIEVYPNE---At-- 893  Vitrella bra...
8TIE_c         535 KP--MIGHGLNVPAIITLENVYPVdkktkkpMKDTTKfAef--qVFDRKLRSM----REMNYISYNPFGGTWTFKVNHFS 606  brewer's yeast
34_pfamImport   73 KP--ALGEGLNKPTRVTLYNIFPK-------AADPSD-Aek--rRYEARVSKNte-kIGAKLVSYDVDIGEWVFETFHWS 139 
XP_002291099   724 KP--RQGSKLNRPAVITMFGIYPKgg---aeSSVEAK-Ekl--kKKIEKSTKK----MGADLLSFDADGGVWTFRVGHFS 791 
XP_002180245   854 KP--KVGSKLNRPAIITFYNIFPKng---gaNASKEE-Ke----KHAKKVQRSta-kIGAEFMSYDRNNGVWKIRVLHFS 922 
XP_002141590  1012 DStiPVGEGLNKKAIILLKNCKPKn------ISTSGN-IeefnaKRISQIKSYte-qMGATFISLDTVTWDWRFEVVHFS 1083
Q5CUL4         976 I---PIGEGLNKKAIITLKNCKPKra---ipSKDPQE-IdefnsNRVKQIKSYte-qMGARFISLDTITWEWKFEVTHFS 1047 Cryptosporid...
Q6BGM0         605 KP--DIGKKLNKECEITFNLPANLkin--------------dasKFEQNLRQQae-gKNIEFLRFDSENRSYTFKVQHFS 667  Paramecium t...
A0CZF0         626 KP--KVNKKLNKSCLITLKVPITInkd--------------nyeTEHKFLQQKck-eQNIELIEIDQIKQQFIVRVDHFS 688  Paramecium t...
XP_001032777   856 KP--KVGEGINNKCMITYKNASSIqrk--ikSGELNL-Qtv--iKCIKKQSDE----QNVQFVKFDQKNLTWTILVDHFS 924 
CEM32306       894 KP--EVGSKLNKRCEVMLKLGVDMqen-fasLKRQFD-Nwr--eRAGERIRVAtervPAAHFINLNVDQLEWHFWVEHFT 967  Vitrella bra...
8TIE_c         607 IWGL 610  brewer's yeast
34_pfamImport  140 RYAM 143 
XP_002291099   792 RYGL 795 
XP_002180245   923 RYGL 926 
XP_002141590  1084 RYKF 1087
Q5CUL4        1048 KYGF 1051 Cryptosporidium parvum
Q6BGM0         668 GYQF 671  Paramecium tetraurelia
A0CZF0         689 IYTF 692  Paramecium tetraurelia
XP_001032777   925 GYQF 928 
CEM32306       968 KYDM 971  Vitrella brassicaformis CCMP3155
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