Conserved Protein Domain Family
MreD

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pfam04093: MreD 
rod shape-determining protein MreD
MreD (murein formation D) is involved in the rod shape determination in E. coli, and more generally in cell shape determination of bacteria whether or not they are rod-shaped.
Statistics
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PSSM-Id: 486862
Aligned: 12 rows
Threshold Bit Score: 76.5509
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9CDJ0   2 SRFTFQFFSPIILFLLMILDGQiTHILTGvssgTWVPVSHLFLIFLMYSVTQHRPSYIIILAAVLGAIYDSYYLGIYGIA 81  Lactococcus lactis su...
Q2FXS7   1 MRTLYYFLIGILLFYIDTAIGLlIPMHIGk--fELVFVPHLTFMYILMMVVYRGFGVSLLLSIFLGVMTDVYFGSIYGVY 78  Staphylococcus aureus...
Q9K8H7   2 SRFILPGLMFFIFVLEGTLFQLvITERFAs---EIMIVPRFLIVMLVFIGIYLGRWSGALYGLIFGLLFDVVYTDLIGVY 78  Bacillus halodurans
Q01467   2 KRFLLPFVMMLVFSAESIFTDL-VHFPFVt--dDQVLAPRFLMLVLIFMSAFINQKHAMIYGFIFGFLYDMNYTSLLGVY 78  Bacillus subtilis sub...
Q8DMY3   4 lKRVGVFLLLPFFVLIDAHISQlLGSFFP----HVHLASHFLFLFLLFETIEVSEYLYLVYCFVIGLVYDVYFFHLIGIT 79  Streptococcus pneumon...
Q97JM9   1 MRKILTLLLCIL--GFTFVDNC-IAPFIA----IRGYYPSFLFVFIISYAIINEGWQGIIIALAAGFLQDIYLFNGIGVN 73  Clostridium acetobuty...
O83512   1 MIRLIAWSVGTS-FLFSIVEMA-VFVHVS----YLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAGIIFDFLSISPFGLH 74  Treponema pallidum
Q9HVU2   6 QGSNNVWVIWLS-LLVGLVLAV-APMPTF----TEIGRPLWLAMLLTYWVLLLPERVGMVTAWLLGLAQDVLYGNLLGQN 79  Pseudomonas aeruginosa
Q9CJP0   3 KRFILQWLILICTFIVALVMEI-APWPTD----FQNFKPAWLVLVLLYWTLALPNKVSIGSAFVLGVIWDLVLGSILGVH 77  Pasteurella multocida
P44476   3 TRFILQWFTILSFFVIAFVLEL-APWPVG----FQMLKPAWLVLVLLYWVLAIPNKVSIGWSFLLGLTWDLILGSTLGVH 77  Haemophilus influenza...
P0ABH4   4 YRSQGRWVIWLS-FLIALLLQI-MPWPDN----LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVR 77  Escherichia coli K-12
Q9KUU8   4 SDIKGRMVILAS-FLLALILQT-IPWPGT----LDLFRPPWLLLVCCYWVLALPHRVNVGSALVMGLLWDLLLGSTLGIR 77  Vibrio cholerae
Q9CDJ0  82 TLLFPLIALFIYNIQITIFTNRwtRLFTTIIIVTA-----FEV---FGAIIMVAFGFAHLNFINFVVYQlaPTL--LLNI 151 Lactococcus lactis su...
Q2FXS7  79 LFGYILFLALIDRFFKIFYKDHsmLFIIILASTLL-----LEV---YVALIYGMLGFIQFDIIHFVVFRllPTL--IMNF 148 Staphylococcus aureus...
Q9K8H7  79 MFGFALLGYGFALTYKWLQYSNltQVTLAFLAVFL-----FEY---YQYGLLQIIGLTEMDHTMFFQHRllPTL--ALNG 148 Bacillus halodurans
Q01467  79 MFGFAGLCYLASKAFKVLHTNAfvVILIAVLAVCL-----LEF---YVFGIQSLIHKDIMTFNGFVLDRfiPTI--LLNI 148 Bacillus subtilis sub...
Q8DMY3  80 TLLFILLGAFLHKLNSVILLNRwtRMLAMIVLTFL-----FEM---GSYLLAFMVGLTVDSMSIFIVYSlvPTM--ILNF 149 Streptococcus pneumon...
Q97JM9  74 LFINLILCYAAGVIGRSLFKEK--AFIPTVIIFFMsvargILM-----FVILYLCGSYSD--IGSSFYA----S--IYDF 138 Clostridium acetobuty...
O83512  75 SFVFTTIGFMVGKVQGRYHIDR--VFAPAVLAGFA-----MIFkvgLVLVLRGVFGPNIQ--VYSVFSR---QL--WIEM 140 Treponema pallidum
Q9HVU2  80 ALILGLITFLVLSLHQRLRM------FPAWQQCLV-----LVV----VYGLAQLLQLWLNALTGN--RP--PTLtfLLPA 140 Pseudomonas aeruginosa
Q9CJP0  78 ALVLSLFTYLVALNHLVLRN------LSLWMQSLL-----VII---FVFSIRFSIFLIEL-LLHSASFN--WQE--SYGA 138 Pasteurella multocida
P44476  78 ALVLSTSMYIIAKNYLILRN------LSLWFQSLL-----VVL---FVFIIRLLIFLVEF-SLHTAFFH--WQA--ILGA 138 Haemophilus influenza...
P0ABH4  78 VLAMSIIAYLVALKYQLFRN------LALWQQALV-----VML---LSLVVDIIVFWAEF-LVINVSFR--PEV--FWSS 138 Escherichia coli K-12
Q9KUU8  78 GMMMSIIIYLVAMNFLVLRN------MALWQQAIV-----IGL---LSMGLEVLIFCGEY-LIQNVTFN--PLS--LWSG 138 Vibrio cholerae
Q9CDJ0 152 ILAVALQFPLEIFYRL 167 Lactococcus lactis subsp. lactis
Q2FXS7 149 VLLIMLYPLIIKFLKK 164 Staphylococcus aureus subsp. aureus NCTC 8325
Q9K8H7 149 AFAILMVLPMRKLLQY 164 Bacillus halodurans
Q01467 149 AAALILVLPFRLFFMS 164 Bacillus subtilis subsp. subtilis str. 168
Q8DMY3 150 LWITVFQFIFEKYYl- 164 Streptococcus pneumoniae R6
Q97JM9 139 IIAIPMYIWVYKLCQK 154 Clostridium acetobutylicum
O83512 141 TLNIVFVPFVFGLLNM 156 Treponema pallidum
Q9HVU2 141 LVSALLWPWVYALLQF 156 Pseudomonas aeruginosa
Q9CJP0 139 LASGLLWPWVFLLLRK 154 Pasteurella multocida
P44476 139 FASGLLWPWVFLLMRK 154 Haemophilus influenzae Rd KW20
P0ABH4 139 VVNGVLWPWIFLLMRK 154 Escherichia coli K-12
Q9KUU8 139 VIACILWPWMFLLLRR 154 Vibrio cholerae
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