4R4C


Conserved Protein Domain Family
Rep-A_N

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pfam04057: Rep-A_N 
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Replication factor-A protein 1, N-terminal domain
Statistics
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PSSM-Id: 397945
Aligned: 11 rows
Threshold Bit Score: 115.879
Threshold Setting Gi: 75337075
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4R4C_A   8 LSRGAIAAIMQk---GDTNI-----KPILQVINIRPITTg-----nSPPRYRLLMSDGLNT-LSSfMLATQLNPLVEEEQ 73  human
Q24492   6 LSTGVIARIMH----GEVVD-----APVLQILAIKKINSa-----aDSERYRILISDGKYFnSYA-MLASQLNVMQHNGE 70  fruit fly
Q92372   5 LSVGALRIINT----SDASSfp--pNPILQVLTVKELNSnpt--sgAPKRYRVVLSDSINY-AQS-MLSTQLNHLVAENK 74  Schizosaccharomyces p...
Q9FHJ6   5 LTEGVVMKMLNgevtSETDM-----MPVLQVTELKLIQSklhqnqeSSNRYKFLLSDGTDL-AAG-MLNTSLNSLVNQGT 77  thale cress
Q5FW17   6 LSEGAISAILG----GDSSC-----KPTLQVINIRSINTg-----nGPPRYRLLMSDGLNT-LSSfMLATQLNFLVDNNL 70  tropical clawed frog
Q9SKI4   5 LTPNAITAIHD----GDVNL-----KPLLQVLEIKMIGRsq---erSQERYRFLISDGVSA-QHA-MVAVQLNDRVKSGQ 70  thale cress
Q6YZ49   6 LTPNGVAAALA----GDTNL-----KPVLQIVELRGVQVnga-gvtRGERFRAVVSDGTAA-SSA-LFAAQLSDHARSGA 73  Japanese rice
Q10Q08   9 VTPGAVAFVLEnaspDAA-TgvpvpEIVLQVVDLKPIGT----------RFTFLASDGKDK-IKT-MLLTQLAPEVRSGN 75  Japanese rice
Q9FME0   5 VTPDAISTVLSnpsfDSSSdr---sEIVVQVVDLKPIG----------NRYTFSANDGKTK-VKA-MFTASLTPEIISGK 69  thale cress
Q9SD82   5 VTQDGIATVLAnqslDSSSVr---pEIVVQVVDLKP----------AGNRYTFSANDGKMK-IKA-MLPATLTSDIISGK 69  thale cress
F4JSG3   5 LTAGAIGKIMNgevtTEADM-----IPVLQVTDLKQIMAqq---dpTRERFRMVLSDGTYL-HQG-MLGTDLNNLVKEGT 74  thale cress
4R4C_A  74 LSSNCVCQIHRFIVNTLKd---GRRVVILMELEVLKS 107 human
Q24492  71 LEEFTIVQLDKYVTSLVGkdgaGKRVLIISELTVVNP 107 fruit fly
Q92372  75 LQKGAFVQLTQFTVNVMKe----RKILIVLGLNVLTE 107 Schizosaccharomyces pombe 972h-
Q9FHJ6  78 IQLGSVIRLTHYICNLIQ----TRRIVVIMQLEVIVE 110 thale cress
Q5FW17  71 LATNCICQVSRFIVNNLKd---GRRVIIVMEMEVLKS 104 tropical clawed frog
Q9SKI4  71 FEKGSIVQLIDYICSDVK----GRKLIVVLNMETIVQ 103 thale cress
Q6YZ49  74 LRRGSIVQLSEYVINEVG----PRRIIVILNLEVLVS 106 Japanese rice
Q10Q08  76 IQNLGVIRVLDYTCNTIGe--kQEKVLIITKLEVVFk 110 Japanese rice
Q9FME0  70 IQNLGLIRLIDFTVNDISs--kSTKYFLVTKCEAVGS 104 thale cress
Q9SD82  70 IQNLGLIRLLEYTVNDIPgk-sEEKYMLITKCEAVAS 105 thale cress
F4JSG3  75 LQPGSIVRLTRFVGDVIK----GRRIVIVPQLEVLKQ 107 thale cress
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