7BME


Conserved Protein Domain Family
RemA-like

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pfam04025: RemA-like (This model is not part of the current CDD release)
Extracellular matrix regulatory protein A-like
This family of mostly uncharacterised proteins includes the extracellular matrix regulatory protein A (RemA) from Bacillus subtilis. RemA is required for biosynthesis of the extracellular matrix and biofilm formation. It binds to DNA at multiple sites upstream of the promoters of the operons eps and tapA-sipW-tasA, which are required for the synthesis of the extracellular matrix components, extracellular polysaccharide and TasA amyloid proteins. SinR negatively regulates eps operon expression by occluding RemA binding. Structure of RemA homologue from Geobacillus thermodenitrificans revealed that it forms an unique octameric ring with the potential to form a 16-meric superstructure and suggests that RemA can wrap DNA around its ring-like structure.
Statistics
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PSSM-Id: 515976
Aligned: 111 rows
Threshold Bit Score: 52.0743
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7BME_A        12 FINIGYGNMVSAAWIITIVSP----DSAPIKRIIQDAREKGKLVDATHGRRTRAVIITD---SDHVILSSVQPETVANRL 84  Geobacillus the...
18_pfamImport  1 FLHIGGDYMVFTKDIVAIIDMerstVSQDTRNFLKTSEEEGFIVNVDENELPKSIIITQgkySNKVYLSPISTTTLYKRF 80 
6_pfamImport   1 FLHLGGDVIIPKEQVIAIIDMqsakKAENNKEFIDQAENEELIFEITKKSKAKSFIVT----SNNVFFSPISSLTLKKR- 75 
WP_006522169   2 FLHLGGDVIVPKKDIVAILDIrs-qSSAITREFLDMAKDEGFIVNISEPGKEKTYIIT----GSEIYLSPISCTTLKKRa 76  Desulfoscipio g...
WP_013486640   2 FIHLGADMVIRANKIIAILDHqskdLSQDNLDFIDYQIKNKKTVAITDDDNPKSIVVT----DKEVYLSPISSQTLKRRa 77  Evansella cellu...
Q8EU84         2 FIHIGNGNVIRTKEIVAIIDCnllsSSSIVDEMMEAWKKNKKV--SGPRKHAKSIMLT----EDHVYFSSLSVATLKKRs 75  Oceanobacillus ...
40_pfamImport  1 -VHIGEDILVRTRDIIAIIDKqsvsSSKYIEEFLQ---QHDQVVNLSKGS-FKSIVVT----GDKVYYSPLASGTLKKR- 70 
WP_011994196   5 ivKINDNVYVVRDRVVAIVPI----SSTISRRIRASNQLGGKMLNVSYGKECRTVIFLN---SGHSLLLAESAKEVRKKv 77  Fervidobacterium
WP_012002596   2 FIQITRGVFVNKDRVKAVIPL----NSVMAKQMREAANFSNKTLNLTYGAQARTVVITD---SGHVFLLGEKVNKVRQKL 74  Pseudothermotoga
WP_013931676   2 LVQVVKGVFVNRDRVKAIIPI----DEITAKNIKDVASYSNKMINLTYGAQARSALIID---SGHILILGEKPQKVRQKL 74  Pseudothermotog...
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