7MQ8,6RXV,6RXV,6FT6


Conserved Protein Domain Family
Sas10_Utp3

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pfam04000: Sas10_Utp3 (This model is not part of the current CDD release)
Sas10/Utp3/C1D family
This family contains Utp3 and LCP5 which are components of the U3 ribonucleoprotein complex. It also includes the human C1D protein and Saccharomyces cerevisiae YHR081W (rrp47), an exosome-associated protein required for the 3' processing of stable RNAs, and Sas10 which has been identified as a regulator of chromatin silencing. This family also includes the human protein Neuroguidin an initiation factor 4E (eIF4E) binding protein.
Statistics
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PSSM-Id: 515958
Aligned: 299 rows
Threshold Bit Score: 30.3607
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7MQ8_NB       230 IEDLKVKLTEVKDE-----LEPLLELV---EqgiippgkGSQYLRTKYNLYLNYCSNISFYlILK-ARRvpah------- 293 human
XP_001908161  212 FEYLVDEFAELQPVlselqKDAVGKPA---K----------SLAVVKSWILGCYVASLASY--FAlLTSptrdgngaaat 276
Q2H8Y5        220 FDYLVDEFRELQPLlptlqKEAEGKPV---K----------SLEVVKSWLLGCYVAALASY--FAiLTSpsrdgngspat 284 Chaetomium glo...
CCE27018      221 FAHLADELEELQPVlaklkTEAAGDQSs--T----------SIHVIKYWVLGCYIATLTSY--FAvLTSpardasqlqkt 286
TDZ18443      214 FEHLINEFQQLQPQlatlqKEANGKSS---Q----------SLEAVRYWVLGCYVASLASY--FAiLTSpsrdgssthkt 278
XP_003048750  214 FEHLVKEFQMLQPElselqKTAQGLSG---Q----------SLEAIKYWVLGCYVSALASY--FAiLTSpardaskaqkt 278
XP_006672494  215 FEYLVTEFEALQPTlvtlkAAAKTTSP---Q----------SLESVKYWVLGCYVAALASY--FAiLAApardtgkvqkp 279
16_pfamImport   1 FDYLVKDFQDLQPQleifrTEAKASDV---K----------SLAAIKYWVLGCYVASLASY--LAiLTSpardaakarkt 65 
XP_656388      14 MKALRENVEELANKinvlnMKLQQNPLktqK--------GISFLDVKYSLLFEYNMYLAYYcWIK-SSGsnve------- 77  Entamoeba hist...
EWY86917      214 FELLVKEFQNLQPTlvdlqKSAQGLSG---Q----------SLEAVKYWVAGCYVAALASY--FAiLTSpardnakvqkt 278 Fusarium oxysp...
7MQ8_NB       294 -------ghpVIERLVTYRNLINK 310 human
XP_001908161  277 lspselrdheVMGTLMECREAWLK 300
Q2H8Y5        285 lnpselrdheVMETLMECREAWLK 308 Chaetomium globosum CBS 148.51
CCE27018      287 lspadlrdhdVMETILQCREAWNR 310
TDZ18443      279 ldpaelrdhdVMETLLECREAWQQ 302
XP_003048750  279 ldpaelrdheVMETLISCREAWQR 302
XP_006672494  280 adpselrdheVMETLVQCRSAWTK 303
16_pfamImport  66 idptelrehdVMETLVQCREAWER 89 
XP_656388      78 -------rhkAIERLFYLRILMER 94  Entamoeba histolytica HM-1:IMSS
EWY86917      279 idptelrdheVMETLMNCRETWQK 302 Fusarium oxysporum NRRL 32931
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