7MQ8,7AJT,6RXV


Conserved Protein Domain Family
Utp11

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pfam03998: Utp11 (This model is not part of the current CDD release)
Utp11 protein
This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome.
Statistics
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PSSM-Id: 515956
Aligned: 156 rows
Threshold Bit Score: 143.137
Created: 13-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7MQ8_SY       13 QREHRERSQPGFRKHL--GLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMT-RVKLQDGVHIiket---- 85  human
XP_002678494  13 RKTKKERSQPKWRRDLgyGTLEKHKDYKVRSRKAHQIEEQKKLLHEQIKNKNEDEYFIDMAhATKTDTGTTViekiptmk 92 
XP_004035419  12 GRKHRERGQLKEREHL--GLLEKKQDYKKRAKHYHKINDILNNLKQKARLKNDDEFYFKMQ-RAKIIDGKHVeqnqede- 87 
XP_004182292  10 KKQHRERSQTAARSRL--GFLEKHKDYVKRAQDYHAKQNTLKILRAKAQSRNEDEFYYGMN-NKTISQPRSNin------ 80 
Q6BXN7        10 KKQHKERSQTQDRAKY--GLLEKKKDYRLRAADYHKKQAALKALKHKASSYNPDEYYHAMT-SKKTDDR-GVlvadr--- 82  Debaryomyces ha...
XP_001486663  10 KKQHRERSQTLDRARF--GLLEKKKDYKLRAADYHKKQSALKALRAKASNYNPDEYYHGMT-RRKTDSR-GIlqadr--- 82 
CCE87321      10 KKQHRERSQVSERSRF--GLLEKKKDYRLRAADYHKKQAAIKALKNKASNYNPDEYYHSMT-KKKTDDK-GVlisdr--- 82 
XP_002490783  10 KKQHRERAQPSERRKL--GLLEKKKDYKLRAKDRHAKEAYLKLLREKAKNRNPDEYYHAMV-NRTTNED-GImleke--- 82 
Q6C7C5        10 KKQHRERSQIAERRHL--GLLEKKKDYKLRAENYHAKEAKLKLLRKKAKERNPDEFYFGMH-STKTDEH-GIgykenpl- 84  Yarrowia lipoly...
EEQ35887      10 KKQHKERSQTSDRAKY--GLLEKKKDYKLRAADFHKKQAALKVLKQKAAQYNPDEYYHAMT-RKKTDEN-GIaiier--- 82  Clavispora lusi...
7MQ8_SY       86 ----------keeVTPEQLKLMRTQ-DVKYIEMKRVAEAKKIERLKSELHLLD-FQgkQ-QNKHVFFFDTKKEVEQFDVA 152 human
XP_002678494  93 kkkealnnlkktkKEQRLFVQQNAEkNLNLLRMKLQIINNNIEKLRRGLGFLEvASksdkkikHKVFLKSKEELETFDPV 172
XP_004035419  88 ---------nedfdkNEFKSLVKAK-NMNLIKVQKHKDMKQIQKLQAQLHNLEgPKmn----qQKYFVDSKEEFDNFQIE 153
XP_004182292  81 -----------tnLSTDEIKLLKSQ-DLNYINTMHAMHKKSIEKQVSNLALPS-----T-NSKHTIFVDSKSQLKTFDPK 142
Q6BXN7        83 ---------gneaMSVQQVKLLKTQ-DVNYIRTMRLNELLKINKQKDNLD-FK-----S-QGKHTVFVDSFDKQKQFKPE 145 Debaryomyces ha...
XP_001486663  83 ---------geevLSVQQVQLLKTQ-DANYVRTMRMNEALKIEKQKNQLD-FG-----A-RGSHTVFVDSVEDQKNFKPE 145
CCE87321      83 ---------gddaLSVQQVKLLKTQ-DANYVRTMRLRELQKISKDKNSLD-FK-----S-EGKHTVFVDSVEGQKEFRPE 145
XP_002490783  83 ---------eepaLTEEEIYLVKTQ-NATYVSAMRNRDLGKIRRMKQALS-YG-----S-EGKHTVFVDNETELETFDPV 145
Q6C7C5        85 -------dvaereLSADAKKLLQTQ-DATYVRTMRLKELRVIERMQAELM-PK-----A-TGKHTIFVNSEKEQEEFDPA 149 Yarrowia lipoly...
EEQ35887      83 --------essesLSAQQLKLLKSQ-DANYVKTMRLNEMQKIEKLKNKLE-FK-----S-SGKHTIFVDSVEEKEQFNPE 146 Clavispora lusi...
7MQ8_SY      153 THLQTAPELVD-------------RVFNRPRietlqkekvkgvtn-----qtglkriakerqkQYNCLTQRIEREKKLFV 214 human
XP_002678494 173 EYFDTDPLLLN-------------QTHNRVKrktlaeqsvqayapnagidayttpatdnatlaEYKKLEKLISKREVIEK 239
XP_004035419 154 KDNQILNQPENlvfifkkifiqlfIFQQRNRrnh--------------------------ykeKLKNLIKNLKKYKRIMK 207
XP_004182292 143 AYFKTTDALLY-------------NKSNRLQkdqlqradiknsnt-----litpadntskklkNLNVLKSKYENLEKLSN 204
Q6BXN7       146 EFFETDKSMLK-------------RRENRLKidqleknenlikqdpi-edqnqkdkqdlkklkQYKLLKRRLEREQQLKE 211 Debaryomyces ha...
XP_001486663 146 EYFDTDKSMVN-------------RRENRLRnldleklervvnve-----dvdverlhekkvkLYKLLKSRMDRERQLRK 207
CCE87321     146 TYFKTDKSLLK-------------RRENRLPidvlenkdnvlrndesgkderskqkeqlnklkQFKLLKGRLERESQLRQ 212
XP_002490783 146 KFFKTDARLLN-------------QRENRLKvdqlldgdlknydqv---fektkldtdaeklkQLKLLKSHMDRAKKLQE 209
Q6C7C5       150 EYFKTDKTLLN-------------KRENRLKldqleqkqthaq--------eldeginkervsRLKKLAAHIERERELAI 208 Yarrowia lipoly...
EEQ35887     147 EYFKTDSSMLE-------------RRENRLRvdqletsnklikrdlf-tdqeerdrlekeklnEYRLLKERMKREKQLRE 212 Clavispora lusi...
7MQ8_SY      215 IAQKIQT--------RKDL-M--DKTq---KVKVKK-ETVNSpA----IYKFQSRRKR 253 human
XP_002678494 240 TINDIEV--------ALQLtLssDKVekieRDKSTErKNLKGdysdvktvQFKKERKR 289
XP_004035419 208 KWKKHILnwiikkicQQYL-SiyLKYknqqKKEKRRiRKYKNgE----VAKFFRERKR 260
XP_004182292 205 VQSILKQ--------QKIL-MnsKVGs---KKMVKN----GV-T----YFKFNKQRSR 241
Q6BXN7       212 VESKMEL--------TKEL-M--KKGs---EKKTVD-SN-GK-V----QFKWKNQRKR 248 Debaryomyces hansenii
XP_001486663 208 VEERMDL--------TREL-M--KKGs---KKKTV--VD-GK-P----QFKWKNQRKK 243
CCE87321     213 VEERMEL--------TKEL-M--KKGs---KKKIKD-AD-GK-V----KYKWKNERKK 249
XP_002490783 210 LHNEIVI--------SKEL-T--KEGe---KEKLIG-SD-GK-P----YYKWKTQRKR 246
Q6C7C5       209 VEHRLDL--------DREL-A--KGGe---KEKVV--KD-GN-V----SYKWKAERKK 244 Yarrowia lipolytica
EEQ35887     213 VEQKMEM--------AKEL-M--KNGd---RRKLVD-SD-GN-V----HFKWKTQRKR 249 Clavispora lusitaniae ATCC 42720
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