Conserved Protein Domain Family
FlgD

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pfam03963: FlgD 
Flagellar hook capping protein - N-terminal region
FlgD is known to be absolutely required for hook assembly, yet it has not been detected in the mature flagellum. It appears to act as a hook-capping protein to enable assembly of hook protein subunits. FlgD regulates the assembly of the hook cap structure to prevent leakage of hook monomers into the medium and hook monomer polymerization and also plays a role in determination of the correct hook length, with the help of the FliK protein. This family represents the N-terminal conserved region of FlgD. A recent crystal structure showed that this region was likely to be flexible and was cleaved off during crystallisation.
Statistics
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PSSM-Id: 427619
Aligned: 45 rows
Threshold Bit Score: 48.3945
Created: 20-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q81FE2                24 NASVNGvqSPVQQTNGVSASNQKTPGIMDKDDFLKLFLASFQHQDPFNAMDMNQMMNQTAQLSLMEQVQNMTKAV 98  Bacillus cer...
CDE35458              13 TSSTTE--STTISSKSTKEKDAKESSTLDVNDFLSLLVTEMQYQDPLEPTDNSQYIAQMATFSQVEATKEM---L 82  Eubacterium ...
CCZ78387              10 NWASVE--NGKVKTTTSKKSDESNNGTMGYDQFLTLLCAEMQYQDPLEPTSNTEYVAQLATFSQLEAMLGMQDTQ 82  Roseburia sp...
WP_014241000          20 KTDTST--KTTKTADEQKLDTAVKGLGDNFEHFLKLLTTQMQNQDPLKPMDTNDMTKQLVDFANVEQNIGSNSRL 92  Azospirillum
WP_014248075          25 ktATET--SKTPQTDADKTASATKGLGDNFQTFLTMLTTQMKNQDPLKPLDTNDMTKQLVDFANVEQNIGTNSRL 97  Azospirillum...
Q6NA81                 9 TTPYSApnPNYSADSAKSKTSSTPGIADNFQTFLTLLTTQLKNQNPTDPLDTNQFTQQLVQFAGIEQQLKTNDSL 83  Rhodopseudom...
WP_009735276          14 SAPATT--SNSSSNSSSGSSTSGATLADNFQSFLMLLTTQLQNQNPLDPLDTNQFTQQLVQFAQVEQQLKSNSQL 86  Bradyrhizobi...
goetting:PGA1_c35910   7 GASASQ--QQQAASTASAEPKKTTGIASDFETFLKMLTAQARYQDPLEPIDSTEYSAQLAQFSMVEQQVQGNEVL 79  Phaeobacter ...
jgi:Terro_1833        11 TQQTAR--VSAYASSASSNSSADDATTITSSDFLTLLVTQMKNQDPTEPTDPSQYLQQLVGVNSLEQLIDVNKQL 83  Terriglobus ...
jgi:AciPR4_1818        9 QHPTAS--AASAMDTSTNPTTATSNDTITSDDFMTLLVAEMQNQDPTAPSDPTQYIQQLVGVNSLQQLIGINTGI 81  Terriglobus ...
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