4WP2,1JKG


Conserved Protein Domain Family
TAP_C

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pfam03943: TAP_C 
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TAP C-terminal domain
The vertebrate Tap protein is a member of the NXF family of shuttling transport receptors for nuclear export of mRNA. Tap has a modular structure, and its most C-terminal domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate nuclear shuttling. The structure of the C-terminal domain is composed of four helices. The structure is related to the UBA domain.
Statistics
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PSSM-Id: 397848
Aligned: 142 rows
Threshold Bit Score: 37.8849
Threshold Setting Gi: 831249085
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4WP2_E         9 LIAEVSRRTGMNVEYSQMXLTGAaNWNLELALQSFEQQK--ANVPPEAF 55  Chaetomium thermophilum var. thermophilum DSM ...
EPS39451     597 MIAQLMGQTGLTQKYAEMCLDQT-GWDLSKALQAFNEVRasGTLPPDAl 644 Dactylellina haptotyla CBS 200.50
EGF78850     682 LVVEFAKATGLNYSYSLLCLQQT-GWSAEAAGQAFLTAK--NMIPPEAF 727 Batrachochytrium dendrobatidis JAM81
XP_002838175 590 MCEQLMAQTRLRSDWATMCLSET-GWNIESAWKAFLEAKanGAIPPDAY 637 Tuber melanosporum Mel28
EPT05658     545 LVMQICQRTGLNVEYAVQCLEGN-AWDVERAVANFEQVK--STLSREAF 590 Fomitopsis pinicola FP-58527 SS1
XP_002470515 146 LVMEVLTRTGLNLEYAVQCLESN-AWDVGRAIANFEQVK--GTLPRDAF 191 Postia placenta Mad-698-R
EGN98717     560 LIMQTCQRTGLNVKFAVDCLQNN-AWDLDRAIANFEQVK--GALSREAF 605 Serpula lacrymans var. lacrymans S7.3
EKM78060     545 LVLQTCARTRLNVNFALDCLHGN-AWDLERAITNFEQVK--DKLPKDAY 590 Agaricus bisporus var. burnettii JB137-S8
XP_003032040 566 MVLELCRRSGLTVSYSVECLVGN-SWDLDRAWANFEAVK--TTLPPDAF 611 Schizophyllum commune H4-8
EOR01337     530 IVCELAVRTRLNYDFSIECLQSN-NWNLEQALNNFEAVK--GSIPEAGF 575 Wallemia ichthyophaga EXF-994
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